Evidence map›Paper›PMID 39327921›Full record

ArticleThe New phytologist2025

Proteolytic processing of both RXLR and EER motifs in oomycete effectors.

Lin Xu, Shumei Wang, Wei Wang, Haixia Wang, Lydia Welsh, Petra C Boevink, Stephen C Whisson, Paul R J Birch

Abstract read
In one paragraph

Article in The New phytologist, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lin XuDivision of Plant Sciences, School of Life Sciences, University of Dundee, at James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.
Shumei WangDivision of Plant Sciences, School of Life Sciences, University of Dundee, at James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.ORCID 0000-0002-1822-6847
Wei WangDivision of Plant Sciences, School of Life Sciences, University of Dundee, at James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.
Haixia WangDivision of Plant Sciences, School of Life Sciences, University of Dundee, at James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.ORCID 0000-0001-5709-4018
Lydia WelshCell and Molecular Sciences, James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.ORCID 0000-0003-1606-0852
Petra C BoevinkCell and Molecular Sciences, James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.ORCID 0000-0002-7021-9097
Stephen C WhissonCell and Molecular Sciences, James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.ORCID 0000-0001-9625-001X
Paul R J BirchDivision of Plant Sciences, School of Life Sciences, University of Dundee, at James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.ORCID 0000-0002-6559-3746

Funding

Biotechnology and Biological Sciences Research Council BB/S003096/1H2020 European Research Council PathEVome (787764)Scottish Government Rural and Environment Science and Analytical Services DivisionUniversity Postgraduate Programme
6 · The paper itself

Abstract

Arg-any amino acid-Leu-Arg (RXLR) effectors are central oomycete virulence factors that suppress plant immunity. Relatively little is known about how they are processed post-translationally before delivery into host cells. A range of molecular, cell and biochemical processes were used to investigate proteolytic processing of RXLR and Glu-Glu-Arg (EER) motifs in Phytophthora infestans effectors. Proteolytic cleavage at the RXLR motif occurred before secretion in all effectors tested, suggesting it is a general rule. Cleavage occurred between the leucine and the second arginine. There was no cleavage of a naturally occurring second RXLR motif in a structured region of Pi21388/AvrBlb1, or one introduced at a similar position in effector Pi04314, in keeping with the motif being positionally constrained, potentially to disordered regions closely following the signal peptide. Remarkably, independent proteolytic cleavage of the EER motif, often found immediately after the RXLR, was also observed, occurring immediately after the arginine. Full-length effectors expressed in host plant Nicotiana benthamiana revealed that, although secreted, they were poorly processed, suggesting that RXLR and EER cleavage does not occur in all eukaryotic cells. We conclude that, whether possessing both RXLR and EER, or either motif alone, these effectors are likely generally proteolytically processed before secretion.

Indexed as

OomycetesPhytophthora infestansProteolysisVirulence FactorsAmino Acid MotifsAmino Acid SequenceNicotianaVirulence Factorscytoplasmic effectoreffector secretionlate blightpathogenicityPhytophthoravirulence

Identifiers

PMID39327921
PMCPMC11754927

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.