Evidence map›Paper›PMID 39333914›Full record

ArticleBMC infectious diseases2024

Development of a clinical risk score for the prediction of Pneumocystis jirovecii pneumonia in hospitalised patients.

Benjamin Mappin-Kasirer, Olivier Del Corpo, Marc-Alexandre Gingras, Aaron Hass, Jimmy M Hsu, Cecilia T Costiniuk, Nicole Ezer, Richard S Fraser, Todd C Lee, Emily G McDonald

Abstract read
In one paragraph

Article in BMC infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Benjamin Mappin-KasirerDepartment of Medicine, McGill University, Montreal, QC, Canada.
Olivier Del CorpoDepartment of Medicine, McGill University, Montreal, QC, Canada.
Marc-Alexandre GingrasDepartment of Medicine, McGill University, Montreal, QC, Canada.
Aaron HassDepartment of Medicine, McGill University, Montreal, QC, Canada.
Jimmy M HsuDepartment of Medicine, McGill University, Montreal, QC, Canada.
Cecilia T CostiniukDivision of Infectious Diseases, McGill University Health Centre, Montreal, QC, Canada.
Nicole EzerDivision of Respiratory Medicine, McGill University Health Centre, Montreal, QC, Canada.
Richard S FraserDepartment of Pathology, McGill University, Montreal, Canada.
Todd C LeeDivision of Infectious Diseases, McGill University Health Centre, Montreal, QC, Canada.
Emily G McDonaldClinical Practice Assessment Unit, Department of Medicine, McGill University Health Centre, Montreal, QC, Canada. emily.mcdonald@mcgill.ca.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe performance and availability of invasive and non-invasive investigations for the diagnosis of Pneumocystis jirovecii pneumonia (PCP) vary across clinical settings. Estimating the pre-test probability of PCP is essential to the optimal selection and interpretation of diagnostic tests, such as the 1,3-β-D-glucan assay (BDG), for the prioritization of bronchoscopy, and to guide empiric treatment decisions. We aimed to develop a multivariable risk score to estimate the pre-test probability of PCP.

methodsThe score was developed from a cohort of 626 individuals who underwent bronchoscopy for the purposes of identifying PCP in a Canadian tertiary-care centre, between 2015 and 2018. We conducted a nested case-control study of 57 cases and 228 unmatched controls. Demographic, clinical, laboratory, and radiological data were included in a multivariable logistic regression model to estimate adjusted odds ratios for PCP diagnosis. A clinical risk score was derived from the multivariable model and discrimination was assessed by estimating the score's receiver operating characteristic curve.

resultsParticipants had a median age of 60 years (interquartile range [IQR] 49-68) and 115 (40%) were female; 40 (14%) had HIV and 49 (17%) had a solid organ transplant (SOT). The risk score included prior SOT or HIV with CD4 ≤ 200/µL (+ 2), serum lactate dehydrogenase ≥ 265.5 IU/mL (+ 2), radiological pattern typical of PCP on chest x-ray (+ 2) or CT scan (+ 2.5), and PCP prophylaxis with trimethoprim-sulfamethoxazole (-3) or other antimicrobials (-2). The median score was 4 points (IQR, 2-4.5) corresponding to a 28% probability of PCP. The risk prediction model had good discrimination with a c-statistic of 0.79 (0.71-0.84). Given the operating characteristics of the BDG assay, scores ≤ 3 in patients without HIV, and ≤ 5.5 in those with HIV, paired with a negative BDG, would be expected to rule out PCP with 95% certainty.

conclusionWe propose the PCP Score to estimate pre-test probability of PCP. Once validated, it should help clinicians determine which patients to refer for invasive investigations, when to rely on serological testing, and in whom to consider pre-emptive treatment.

Indexed as

Pneumocystis cariniiPneumonia, PneumocystisAgedBronchoscopyCanadaCase-Control StudiesFemaleHospitalizationHumansLogistic ModelsMaleMiddle AgedRisk AssessmentRisk FactorsROC CurveClinical risk scoreFungal infectionsInfections in immunocompromised hostsOpportunistic infectionsPneumocystis jirovecii pneumoniaPulmonary infections

Identifiers

PMID39333914
PMCPMC11429489

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.