Evidence mapPaperPMID 39334442Full record

ReviewVirology journal2024

Aggravating mechanisms from COVID-19.

Jong Hoon Lee, Consolato Sergi, Richard E Kast, Badar A Kanwar, Jean Bourbeau, Sangsuk Oh, Mun-Gi Sohn, Chul Joong Lee, Michael D Coleman

Abstract readReview
In one paragraph

Review in Virology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jong Hoon LeeScience and Research Center, Seoul National University College of Medicine, 103 Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea. science@research.re.kr.
Consolato SergiDivision of Anatomical Pathology, Children's Hospital of Eastern Ontario (CHEO), University of Ottawa, 401 Smyth Road, Ottawa, ON, K1H 8L1, Canada.
Richard E KastIIAIGC Study Center, 11 Arlington Ct, Burlington, 05408 VT, USA.
Badar A KanwarHaider Associates, 1999 Forest Ridge Dr, Bedford, TX, 76021, USA.
Jean BourbeauRespiratory Epidemiology and Clinical Research Unit, McGill University Health Centre, Montréal, QC, Canada.
Sangsuk OhDepartment of Food Engineering, Food Safety Laboratory, Memory Unit, Ewha Womans University, Seoul, 03670, Korea.
Mun-Gi SohnDepartment of Food Science, KyungHee University College of Life Science, Seoul, 17104, Republic of Korea.
Chul Joong LeeDepartment of Anesthesiology, Seoul National University Hospital, Seoul, Republic of Korea.
Michael D ColemanCollege of Health and Life Sciences, Aston University, Birmingham, B4 7ET, UK. m.d.coleman@aston.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) induces immune-mediated diseases. The pathophysiology of COVID-19 uses the following three mechanisms: (1) inflammasome activation mechanism; (2) cGAS-STING signaling mechanism; and (3) SAMHD1 tetramerization mechanism, which leads to IFN-I production. Interactions between the host and virus govern induction, resulting in multiorgan impacts. The NLRP3 with cGAS-STING constitutes the primary immune response. The expression of SARS-CoV-2 ORF3a, NSP6, NSP7, and NSP8 blocks innate immune activation and facilitates virus replication by targeting the RIG-I/MDA5, TRIF, and cGAS-STING signaling. SAMHD1 has a target motif for CDK1 to protect virion assembly, threonine 592 to modulate a catalytically active tetramer, and antiviral IFN responses to block retroviral infection. Plastic and allosteric nucleic acid binding of SAMHD1 modulates the antiretroviral activity of SAMHD1. Therefore, inflammasome activation, cGAS-STING signaling, and SAMHD1 tetramerization explain acute kidney injury, hepatic, cardiac, neurological, and gastrointestinal injury of COVID-19. It might be necessary to effectively block the pathological courses of diverse diseases.

Indexed as

COVID-19Immunity, InnateInflammasomesSARS-CoV-2Signal TransductionCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseHumansMembrane ProteinsNucleotidyltransferasesSAM Domain and HD Domain-Containing Protein 1STING ProteinVirus ReplicationcGAS protein, humanCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseInflammasomesMembrane ProteinsNucleotidyltransferasesSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, humanSTING1 protein, humanSTING ProteinCGAS–STINGCOVID-19InflammasomeNLRP3SAMHD1SARS-CoV-2

Identifiers

PMID39334442
PMCPMC11430051

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.