Evidence map›Paper›PMID 39348175›Full record

ArticleJMIR cardio2024

Identifying the Severity of Heart Valve Stenosis and Regurgitation Among a Diverse Population Within an Integrated Health Care System: Natural Language Processing Approach.

Fagen Xie, Ming-Sum Lee, Salam Allahwerdy, Darios Getahun, Benjamin Wessler, Wansu Chen

Abstract read
In one paragraph

Article in JMIR cardio, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Fagen XieDepartment of Research and Evaluation, Kaiser Permanente Southern California, Pasadena, CA, United States.ORCID https://orcid.org/0000-0002-1565-0490
Ming-Sum LeeDepartment of Cardiology, Los Angeles Medical Center, Kaiser Permanente Southern California, Pasadena, CA, United States.ORCID https://orcid.org/0000-0001-6121-6452
Salam AllahwerdyDepartment of Clinical Science, Kaiser Permanente Bernard J Tyson School of Medicine, Pasadena, CA, United States.ORCID https://orcid.org/0000-0003-2206-8033
Darios GetahunDepartment of Research and Evaluation, Kaiser Permanente Southern California, Pasadena, CA, United States.ORCID https://orcid.org/0000-0003-3610-8841
Benjamin WesslerDivision of Cardiology, Tufts Medical Center, Boston, MA, United States.ORCID https://orcid.org/0000-0002-8652-1426
Wansu ChenDepartment of Research and Evaluation, Kaiser Permanente Southern California, Pasadena, CA, United States.ORCID https://orcid.org/0000-0002-3486-7468

Funding

Palliative Care for High-Risk TAVR Patients: The Impact of MultimorbidityK23AG055667 · NIA · TUFTS MEDICAL CENTER · PI WESSLER, BENJAMIN SETH · 2018 to 2022
$948k
NIA NIH HHS K23 AG055667
6 · The paper itself

Abstract

backgroundValvular heart disease (VHD) is a leading cause of cardiovascular morbidity and mortality that poses a substantial health care and economic burden on health care systems. Administrative diagnostic codes for ascertaining VHD diagnosis are incomplete.

objectiveThis study aimed to develop a natural language processing (NLP) algorithm to identify patients with aortic, mitral, tricuspid, and pulmonic valve stenosis and regurgitation from transthoracic echocardiography (TTE) reports within a large integrated health care system.

methodsWe used reports from echocardiograms performed in the Kaiser Permanente Southern California (KPSC) health care system between January 1, 2011, and December 31, 2022. Related terms/phrases of aortic, mitral, tricuspid, and pulmonic stenosis and regurgitation and their severities were compiled from the literature and enriched with input from clinicians. An NLP algorithm was iteratively developed and fine-trained via multiple rounds of chart review, followed by adjudication. The developed algorithm was applied to 200 annotated echocardiography reports to assess its performance and then the study echocardiography reports.

resultsA total of 1,225,270 TTE reports were extracted from KPSC electronic health records during the study period. In these reports, valve lesions identified included 111,300 (9.08%) aortic stenosis, 20,246 (1.65%) mitral stenosis, 397 (0.03%) tricuspid stenosis, 2585 (0.21%) pulmonic stenosis, 345,115 (28.17%) aortic regurgitation, 802,103 (65.46%) mitral regurgitation, 903,965 (73.78%) tricuspid regurgitation, and 286,903 (23.42%) pulmonic regurgitation. Among the valves, 50,507 (4.12%), 22,656 (1.85%), 1685 (0.14%), and 1767 (0.14%) were identified as prosthetic aortic valves, mitral valves, tricuspid valves, and pulmonic valves, respectively. Mild and moderate were the most common severity levels of heart valve stenosis, while trace and mild were the most common severity levels of regurgitation. Males had a higher frequency of aortic stenosis and all 4 valvular regurgitations, while females had more mitral, tricuspid, and pulmonic stenosis. Non-Hispanic Whites had the highest frequency of all 4 valvular stenosis and regurgitations. The distribution of valvular stenosis and regurgitation severity was similar across race/ethnicity groups. Frequencies of aortic stenosis, mitral stenosis, and regurgitation of all 4 heart valves increased with age. In TTE reports with stenosis detected, younger patients were more likely to have mild aortic stenosis, while older patients were more likely to have severe aortic stenosis. However, mitral stenosis was opposite (milder in older patients and more severe in younger patients). In TTE reports with regurgitation detected, younger patients had a higher frequency of severe/very severe aortic regurgitation. In comparison, older patients had higher frequencies of mild aortic regurgitation and severe mitral/tricuspid regurgitation. Validation of the NLP algorithm against the 200 annotated TTE reports showed excellent precision, recall, and F1-scores.

conclusionsThe proposed computerized algorithm could effectively identify heart valve stenosis and regurgitation, as well as the severity of valvular involvement, with significant implications for pharmacoepidemiological studies and outcomes research.

Indexed as

Delivery of Health Care, IntegratedNatural Language ProcessingSeverity of Illness IndexAdultAgedAlgorithmsCaliforniaEchocardiographyFemaleHeart Valve DiseasesHumansMaleMiddle Agedalgorithmechocardiography reportheart valvenatural language processingregurgitationstenosis

Identifiers

PMID39348175
PMCPMC11474122

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.