Evidence map›Paper›PMID 39348182›Full record

ArticleJournal of the American Chemical Society2024

Activity-Based Acylome Profiling with

Elizabeth M Ryan, Michael A Norinskiy, Amy K Bracken, Emma E Lueders, Xueer Chen, Qin Fu, Elizabeth T Anderson, Sheng Zhang, Mikail E Abbasov

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Elizabeth M RyanDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.ORCID 0000-0002-1935-9174
Michael A NorinskiyDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.
Amy K BrackenDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.
Emma E LuedersDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.ORCID 0009-0003-9103-1936
Xueer ChenDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.
Qin FuProteomics and Metabolomics Facility, Cornell University, Ithaca, New York 14853, United States.
Elizabeth T AndersonProteomics and Metabolomics Facility, Cornell University, Ithaca, New York 14853, United States.
Sheng ZhangProteomics and Metabolomics Facility, Cornell University, Ithaca, New York 14853, United States.
Mikail E AbbasovDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.ORCID 0000-0002-0542-9696

Funding

Chemoproteomic mapping of the ligandable ribonucleoproteome using phloroglucinol meroterpenoidsR35GM143027 · NIGMS · CORNELL UNIVERSITY · PI ABBASOV, MIKAIL E · 2021 to 2024
$1.5M
Acquisition of a Hybrid Quadrupole Time of Flight LC-MS/MS System for the CornellS10OD017992 · OD · CORNELL UNIVERSITY · PI ZHANG, SHENG · 2014 to 2014
$600k
NIGMS NIH HHS R35 GM143027NIH HHS S10 OD017992
6 · The paper itself

Abstract

Lysine acylations are ubiquitous and structurally diverse post-translational modifications that vastly expand the functional heterogeneity of the human proteome. Hence, the targeted acylation of lysine residues has emerged as a strategic approach to exert biomimetic control over the protein function. However, existing strategies for targeted lysine acylation in cells often rely on genetic intervention, recruitment of endogenous acylation machinery, or nonspecific acylating agents and lack methods to quantify the magnitude of specific acylations on a global level. In this study, we develop activity-based acylome profiling (ABAP), a chemoproteomic strategy that exploits elaborate

Indexed as

AmidesLysineProtein Processing, Post-TranslationalAcylationHumansProteomeStructure-Activity RelationshipAmidesLysineProteome

Identifiers

PMID39348182
PMCPMC11899832

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.