Evidence map›Paper›PMID 39350090›Full record

ArticleBMC gastroenterology2024

Integration of bile proteomics and metabolomics analyses reveals novel insights into different types of gallstones in a high-altitude area.

Xiaofeng Jing, Ying Ma, Defu Li, Tiecheng Zhang, Haiqi Xiang, Fan Xu, Yonghong Xia

Abstract read
In one paragraph

Article in BMC gastroenterology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiaofeng Jing *Department of Evidence-Based Medicine and Social Medicine, School of Public Health, Chengdu Medical College, Xindu avenue 783, Chengdu, Sichuan, 610500, China.
Ying Ma *Department of Hepatobiliary Surgery, Qinghai Provincial Traffic Hospital, Traffic lane 7, Xining, 810001, China.
Defu LiDepartment of Hepatobiliary Surgery, Qinghai Provincial Traffic Hospital, Traffic lane 7, Xining, 810001, China.
Tiecheng ZhangDepartment of Evidence-Based Medicine and Social Medicine, School of Public Health, Chengdu Medical College, Xindu avenue 783, Chengdu, Sichuan, 610500, China.
Haiqi XiangDepartment of Evidence-Based Medicine and Social Medicine, School of Public Health, Chengdu Medical College, Xindu avenue 783, Chengdu, Sichuan, 610500, China.
Fan XuDepartment of Evidence-Based Medicine and Social Medicine, School of Public Health, Chengdu Medical College, Xindu avenue 783, Chengdu, Sichuan, 610500, China. xufan@cmc.edu.cn.
Yonghong XiaDepartment of Hepatobiliary Surgery, Qinghai Provincial Traffic Hospital, Traffic lane 7, Xining, 810001, China. XyhQhsjtyy@126.com.

Funding

Chengdu Medical College Key discipline project in the School of Public Health (no.21)Qinghai Provincial Department of Science and Technology 2023-SF-117
6 · The paper itself

Abstract

backgroundTo explore the pathogenesis of different subtypes of gallstones in high-altitude populations from a molecular perspective.

methodsWe collected bile samples from 20 cholesterol gallstone disease (CGD) patients and 20 pigment gallstone disease (PGD) patients. Proteomics analysis was performed by LC/MS DIA, while metabolomics analysis was performed by UPLC- Q-TOF/MS.

resultsWe identified 154 up-regulated and 196 down-regulated differentially expressed proteins, which were significantly enriched in neurodegenerative diseases, energy metabolism, amino acid metabolism etc. In metabolomics analysis, 20 up-regulated and 63 down-regulated differentially expressed metabolites were identified, and they were significantly enriched in vitamin B6 metabolism. Three pathways of integrated proteomics and metabolomics were significantly enriched: porphyrin and chlorophyll metabolism, riboflavin metabolism and aminoacyl-tRNA biosynthesis. Remarkably, 7 differentially expressed proteins and metabolites showed excellent predictive performance and were selected as potential biomarkers.

conclusionThe findings of our metabolomics and proteomics analyses help to elucidate the underlying mechanisms of gallstone formation in high-altitude populations.

Indexed as

AltitudeBileBiomarkersGallstonesMetabolomicsProteomicsAdultAgedCholesterolDown-RegulationFemaleHumansMaleMiddle AgedUp-RegulationBiomarkersCholesterolBileCholesterol gallstoneHigh altitudeMetabolomicsPigment gallstoneProteomics

Identifiers

PMID39350090
PMCPMC11440720

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.