Evidence map›Paper›PMID 39354672›Full record

ArticleEnvironmental microbiology reports2024

The hepatopancreas microbiome of velvet crab, Necora puber.

Signe Martin, Cindy Smith, Kelly Stewart, William Barr, Deborah Cheslett, Ian O'Connor, Fiona Swords, Umer Zeeshan Ijaz, Katie O'Dwyer

Abstract read
In one paragraph

Article in Environmental microbiology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Virulence · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The hepatopancreas microbiome of velvet crab, Necora puber.Environmental microbiology reports · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Signe MartinMarine and Freshwater Research Centre, Atlantic Technological University, Galway, Ireland.ORCID https://orcid.org/0009-0009-6331-4043
Cindy SmithJames Watt School of Engineering, University of Glasgow, Glasgow, UK.
Kelly StewartJames Watt School of Engineering, University of Glasgow, Glasgow, UK.
William BarrJames Watt School of Engineering, University of Glasgow, Glasgow, UK.
Deborah CheslettMarine Institute, Oranmore, Ireland.
Ian O'ConnorMarine and Freshwater Research Centre, Atlantic Technological University, Galway, Ireland.
Fiona SwordsMarine Institute, Oranmore, Ireland.
Umer Zeeshan IjazJames Watt School of Engineering, University of Glasgow, Glasgow, UK.
Katie O'DwyerMarine and Freshwater Research Centre, Atlantic Technological University, Galway, Ireland.

Funding

Marine Institute CF/18/04/01
6 · The paper itself

Abstract

Crustaceans are a valuable resource globally, both ecologically and economically, and investigations into their health are becoming increasingly important as exploitation rises. The microbiome plays a crucial role in crustacean immunity, and understanding its composition and structure can provide insights into the health of an organism and its interactions with various factors. In this study, we investigated the hepatopancreas microbiome of the velvet swimming crab, Necora puber, and compared its composition and structure with several study factors, including two different sampling points and infection with a paramyxid parasite, Paramarteilia canceri. To our knowledge, we provide the first description of a velvet crab microbiome, highlighting the dominance of a single microorganism, Candidatus hepatoplasma. We identified variations in microbiome composition between sampling points and discussed the possible processes affecting microbiome assembly. We also outline a core microbiome for the velvet crab hepatopancreas, consisting of 12 core phyla. Our study adds to the growing literature on crustacean microbiomes and provides a baseline for future investigations into the velvet crab microbiome and the health of this crustacean species.

Indexed as

HepatopancreasMicrobiotaAnimalsBacteriaBrachyuraPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID39354672
PMCPMC11445078

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.