Evidence map›Paper›PMID 39358423›Full record

ArticleScientific reports2024

Structural study of the intrinsically disordered tardigrade damage suppressor protein (Dsup) and its complex with DNA.

Mikhail Zarubin, Tatiana Murugova, Yury Ryzhykau, Oleksandr Ivankov, Vladimir N Uversky, Elena Kravchenko

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Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mikhail Zarubin *Dzhelepov Laboratory of Nuclear Problems, Joint Institute for Nuclear Research, Dubna, Russia.
Tatiana Murugova *Frank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, Dubna, Russia.
Yury RyzhykauFrank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, Dubna, Russia.
Oleksandr IvankovFrank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, Dubna, Russia.
Vladimir N UverskyResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.
Elena KravchenkoDzhelepov Laboratory of Nuclear Problems, Joint Institute for Nuclear Research, Dubna, Russia. elenakravchenko@jinr.ru.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Studies of proteins, found in one of the most stress-resistant animals tardigrade Ramazzottius varieornatus, aim to reveal molecular principles of extreme tolerance to various types of stress and developing applications based on them for medicine, biotechnology, pharmacy, and space research. Tardigrade DNA/RNA-binding damage suppressor protein (Dsup) reduces DNA damage caused by reactive oxygen spices (ROS) produced upon irradiation and oxidative stresses in Dsup-expressing transgenic organisms. This work is focused on the determination of structural features of Dsup protein and Dsup-DNA complex, which refines details of protective mechanism. For the first time, intrinsically disordered nature of Dsup protein with highly flexible structure was experimentally proven and characterized by the combination of small angle X-ray scattering (SAXS) technique, circular dichroism spectroscopy, and computational methods. Low resolution models of Dsup protein and an ensemble of conformations were presented. In addition, we have shown that Dsup forms fuzzy complex with DNA.

Indexed as

Arthropod ProteinsTardigradaAnimalsCircular DichroismDNADNA-Binding ProteinsDNA DamageIntrinsically Disordered ProteinsModels, MolecularProtein BindingProtein ConformationScattering, Small AngleX-Ray DiffractionArthropod ProteinsDNADNA-Binding ProteinsIntrinsically Disordered ProteinsDamage suppressor proteinDNA-binding IDPsDNA-protectionDsupIntrinsically disordered proteinsTardigrade

Identifiers

PMID39358423
PMCPMC11447161

What Socratic holds

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.