Evidence map›Paper›PMID 39363202›Full record

SynthesisJournal of translational medicine2024

Mitochondrial dysfunction gene expression, DNA methylation, and inflammatory cytokines interaction activate Alzheimer's disease: a multi-omics Mendelian randomization study.

Xiao-Xue Zhang, Meng Wei, He-Ran Wang, Ya-Zhuo Hu, Hong-Mei Sun, Jian-Jun Jia

Abstract readMeta-Analysis
In one paragraph

Synthesis in Journal of translational medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiao-Xue ZhangMedical School of Chinese People's Liberation Army, 28 Fuxing Road, 100853, Beijing, China.
Meng WeiInstitute of Geriatrics, The 2nd Medical Center, National Clinical Research Center for Geriatric Disease, Chinese People's Liberation Army General Hospital, 28 Fuxing Road, 100853, Beijing, China.
He-Ran WangInstitute of Geriatrics, The 2nd Medical Center, National Clinical Research Center for Geriatric Disease, Chinese People's Liberation Army General Hospital, 28 Fuxing Road, 100853, Beijing, China.
Ya-Zhuo HuInstitute of Geriatrics, The 2nd Medical Center, National Clinical Research Center for Geriatric Disease, Chinese People's Liberation Army General Hospital, 28 Fuxing Road, 100853, Beijing, China.
Hong-Mei SunMedical School of Chinese People's Liberation Army, 28 Fuxing Road, 100853, Beijing, China.
Jian-Jun JiaMedical School of Chinese People's Liberation Army, 28 Fuxing Road, 100853, Beijing, China. jiajianjun301@126.com.

Funding

the national key research and development plan 2023YFC3605403
6 · The paper itself

Abstract

backgroundMitochondrial dysfunction (MD) is increasingly recognized as a key pathophysiological contributor in Alzheimer disease (AD). As differential MD genes expression may serve as either a causative factor or a consequence in AD, and expression of these genes could be influenced by epigenetic modifications or interact with inflammatory cytokines, hence, the precise role of MD in AD remains uncertain.

methodsMeta-analysis of brain transcriptome datasets was conducted to pinpoint differentially expressed genes (DEGs) associated with MD in AD. We utilized three-step SMR to analyze the AD genome-wide association study summaries with expression quantitative trait loci (eQTLs) and DNA methylation QTLs from the blood and brain tissues, respectively. Through SMR and colocalization analysis, we further explored the interactions between brain eQTLs and inflammatory cytokines.

resultsFive datasets were meta-analyzed to prioritize 825 DEGs in AD from 1339 MD-related genes. Among these, seven genes from blood samples such as NDUFS8 and SPG7 and thirty-two genes from brain tissue including CLU and MAPT were identified as candidate AD-causal MD genes and regulated by methylation level. Furthermore, we revealed 13 MD gene expression-inflammatory pathway pairs involving LDLR, ACE and PTPMT1 along with interleukin-17C, interleukin-18 and hepatocyte growth factor.

conclusionsThis study highlighted that the AD-causal MD genes could be regulated by epigenetic changes and interact with inflammatory cytokines, providing evidence for AD prevention and intervention.

Indexed as

Alzheimer DiseaseCytokinesDNA MethylationMendelian Randomization AnalysisMitochondriaQuantitative Trait LociBrainGene Expression RegulationGenome-Wide Association StudyGenomicsHumansInflammationInflammation MediatorsMultiomicsTranscriptomeCytokinesInflammation MediatorsAlzheimer diseaseInflammationIntegrative omicsMendelian randomizationMitochondrial dysfunction

Identifiers

PMID39363202
PMCPMC11448268

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.