Evidence map›Paper›PMID 39380239›Full record

ArticleGenes to cells : devoted to molecular & cellular mechanisms2024

Evolution of the Cdk4/6-Cdkn2 system in invertebrates.

Shiori Yuki, Shunsuke Sasaki, Yuta Yamamoto, Fumika Murakami, Kazumi Sakata, Isato Araki

Abstract read
In one paragraph

Article in Genes to cells : devoted to molecular & cellular mechanisms, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Evolution of the Cdk4/6-Cdkn2 system in invertebrates.Genes to cells : devoted to molecular & cellular mechanisms · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shiori YukiGraduate School of Arts and Sciences, Iwate University, Morioka, Japan.
Shunsuke SasakiFaculty of Science and Engineering, Iwate University, Morioka, Japan.
Yuta YamamotoFaculty of Science and Engineering, Iwate University, Morioka, Japan.
Fumika MurakamiGraduate School of Arts and Sciences, Iwate University, Morioka, Japan.
Kazumi SakataGraduate School of Arts and Sciences, Iwate University, Morioka, Japan.
Isato ArakiGraduate School of Arts and Sciences, Iwate University, Morioka, Japan.ORCID https://orcid.org/0009-0003-5044-2915

Funding

Iwate University
6 · The paper itself

Abstract

The cell cycle is driven by cyclin-dependent kinases (Cdks). The decision whether the cell cycle proceeds is made during G1 phase, when Cdk4/6 functions. Cyclin-dependent kinase inhibitor 2 (Cdkn2) is a specific inhibitor of Cdk4/6, and their interaction depends on D84 in Cdkn2 and R24/31 in Cdk4/6. This knowledge is based mainly on studies in mammalian cells. Here, we comprehensively analyzed Cdk4/6 and Cdkn2 in invertebrates and found that Cdk4/6 was present in most of the investigated phyla, but the distribution of Cdkn2 was rather uneven among and within the phyla. The positive charge of R24/R31 in Cdk4/6 was conserved in all analyzed species in phyla with Cdkn2. The presence of Cdkn2 and the conservation of the positive charge were statistically correlated. We also found that Cdkn2 has been tightly linked to Fas associated factor 1 (Faf1) during evolution. We discuss potential interactions between Cdkn2 and Cdk4/6 in evolution and the possible cause of the strong conservation of the microsynteny.

Indexed as

Cyclin-Dependent Kinase 4Cyclin-Dependent Kinase 6Evolution, MolecularInvertebratesAnimalsPhylogenyCyclin-Dependent Kinase 4Cyclin-Dependent Kinase 6cell cycle regulationcomparative genomicscyclin‐dependent kinasecyclin‐dependent kinase inhibitorevolutioninvertebratessyntenytumor suppressor

Identifiers

PMID39380239
PMCPMC11555623

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.