Evidence map›Paper›PMID 39392286›Full record

ArticleEnvironmental microbiology reports2024

Genomic and biogeographic characterisation of the novel prasinovirus Mantoniella tinhauana virus 1.

Elvira Rey Redondo, Shara Ka Kiu Leung, Charmaine Cheuk Man Yung

Abstract read
In one paragraph

Article in Environmental microbiology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Genomic analysis ofVirus evolution · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Elvira Rey RedondoDepartment of Ocean Science, The Hong Kong University of Science and Technology, Hong Kong, Hong Kong SAR.ORCID https://orcid.org/0000-0001-8920-5579
Shara Ka Kiu LeungDepartment of Ocean Science, The Hong Kong University of Science and Technology, Hong Kong, Hong Kong SAR.ORCID https://orcid.org/0000-0002-0017-3513
Charmaine Cheuk Man YungDepartment of Ocean Science, The Hong Kong University of Science and Technology, Hong Kong, Hong Kong SAR.ORCID https://orcid.org/0000-0002-1316-2530

Funding

Research Grants Council, University Grants Committee, Hong Kong 26100521
6 · The paper itself

Abstract

Mamiellophyceae are a ubiquitous class of unicellular green algae in the global ocean. Their ecological importance is highlighted in studies focused on the prominent genera Micromonas, Ostreococcus, and Bathycoccus. Mamiellophyceae are susceptible to prasinoviruses, double-stranded DNA viruses belonging to the nucleocytoplasmic large DNA virus group. Our study represents the first isolation of a prasinovirus in the South China Sea and the only one to infect the globally distributed genus Mantoniella. We conducted a comparative analysis with previously identified viral relatives, encompassing morphological characteristics, host specificity, marker-based phylogenetic placement, and whole-genome sequence comparisons. Although it shares morphological and genetic similarities with established prasinoviruses, this novel virus showed distinct genetic traits, confining its infection to the species Mantoniella tinhauana. We also explored the global biogeography of this prasinovirus and its host by mapping metagenomic data and analysing their relationship with various environmental parameters. Our results demonstrate a pronounced link between the virus and its host, both found predominantly in higher latitudes in the surface ocean. By gaining an increased understanding of the relationships between viruses, hosts, and environments, researchers can better make predictions and potentially implement measures to mitigate the consequences of climate change on oceanic processes.

Indexed as

Genome, ViralPhylogenyChinaChlorophytaGenomicsHost SpecificityPhycodnaviridaePhylogeographySeawater

Identifiers

PMID39392286
PMCPMC11467894

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.