Evidence map›Paper›PMID 39395581›Full record

ArticleMolecular & cellular proteomics : MCP2024

Proteomic Characterization of 1000 Human and Murine Neutrophils Freshly Isolated From Blood and Sites of Sterile Inflammation.

Susmita Ghosh, Ali Ata Tuz, Martin Stenzel, Vikramjeet Singh, Mathis Richter, Oliver Soehnlein, Emanuel Lange, Robert Heyer, Zülal Cibir, Alexander Beer and 7 more

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Susmita GhoshLeibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Dortmund, Germany.
Ali Ata TuzInstitute for Experimental Immunology and Imaging, University Hospital, University of Duisburg-Essen, Essen, Germany.
Martin StenzelLeibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Dortmund, Germany.
Vikramjeet SinghInstitute for Experimental Immunology and Imaging, University Hospital, University of Duisburg-Essen, Essen, Germany.
Mathis RichterInstitute for Experimental Pathology, University of Münster, Münster, Germany.
Oliver SoehnleinInstitute for Experimental Pathology, University of Münster, Münster, Germany.
Emanuel LangeLeibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Dortmund, Germany.
Robert HeyerLeibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Dortmund, Germany; Multidimensional Omics Analyses Group, Faculty of Technology, Bielefeld University, Universitätsstraße 25, Bielefeld, Germany.
Zülal CibirInstitute for Experimental Immunology and Imaging, University Hospital, University of Duisburg-Essen, Essen, Germany.
Alexander BeerInstitute for Experimental Immunology and Imaging, University Hospital, University of Duisburg-Essen, Essen, Germany.
Marcel JungInstitute for Experimental Immunology and Imaging, University Hospital, University of Duisburg-Essen, Essen, Germany.
Dennis NagelInstitute for Experimental Immunology and Imaging, University Hospital, University of Duisburg-Essen, Essen, Germany.
Dirk M HermannDepartment of Neurology, University Hospital Essen, University of Duisburg-Essen, Essen, Germany.
Anja HasenbergInstitute for Experimental Immunology and Imaging, University Hospital, University of Duisburg-Essen, Essen, Germany.
Anika GrüneboomLeibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Dortmund, Germany.
Albert SickmannLeibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Dortmund, Germany; Medizinisches Proteom-Center, Ruhr-Universität Bochum, Bochum, Germany; Department of Chemistry, College of Physical Sciences, University of Aberdeen, Aberdeen, UK. Electronic address: albert.sickmann@isas.de.
Matthias GunzerLeibniz-Institut für Analytische Wissenschaften - ISAS - e.V., Dortmund, Germany; Institute for Experimental Immunology and Imaging, University Hospital, University of Duisburg-Essen, Essen, Germany. Electronic address: matthias.gunzer@isas.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neutrophils are indispensable for defense against pathogens. Injured tissue-infiltrated neutrophils can establish a niche of chronic inflammation and promote degeneration. Studies investigated transcriptome of single-infiltrated neutrophils which could misinterpret molecular states of these post mitotic cells. However, neutrophil proteome characterization has been challenging due to low harvests from affected tissues. Here, we present a workflow to obtain proteome of 1000 murine and human tissue-infiltrated neutrophils. We generated spectral libraries containing ∼6200 mouse and ∼5300 human proteins from circulating neutrophils. 4800 mouse and 3400 human proteins were recovered from 1000 cells with 10

Indexed as

InflammationProteinsProteomeAdultAnimalsFemaleGenomic LibraryHumansMaleMiceMice, Inbred C57BLProteomicsStrokeProteinsProteomecirculationinflammationlow input proteomicsneutrophilsstroketransmigration

Identifiers

PMID39395581
PMCPMC11630641

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.