Evidence map›Paper›PMID 39396080›Full record

ArticleScientific reports2024

Validation of a blood biomarker panel for machine learning-based radiation biodosimetry in juvenile and adult C57BL/6 mice.

Leah Nemzow, Michelle A Phillippi, Karthik Kanagaraj, Igor Shuryak, Maria Taveras, Xuefeng Wu, Helen C Turner

Erratum issuedAbstract readValidation Study
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Leah NemzowCenter for Radiological Research, Columbia University Irving Medical Center, New York, NY, USA. Ln2432@cumc.columbia.edu.
Michelle A PhillippiCenter for Radiological Research, Columbia University Irving Medical Center, New York, NY, USA.
Karthik KanagarajCenter for Radiological Research, Columbia University Irving Medical Center, New York, NY, USA.
Igor ShuryakCenter for Radiological Research, Columbia University Irving Medical Center, New York, NY, USA.
Maria TaverasCenter for Radiological Research, Columbia University Irving Medical Center, New York, NY, USA.
Xuefeng WuCenter for Radiological Research, Columbia University Irving Medical Center, New York, NY, USA.
Helen C TurnerCenter for Radiological Research, Columbia University Irving Medical Center, New York, NY, USA.

Funding

Development of FAST-DOSE assay system for the rapid assessment of acute radiation exposure, individual radiosensitivity and injury in victims for a large-scale radiological incidentU01AI148309 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI TURNER, HELEN C · 2020 to 2024
$3.2M
National Institute of Allergy and Infectious Diseases U01 #AI148309NIAID NIH HHS U01 AI148309
6 · The paper itself

Abstract

Following a large-scale radiological event, timely collection of samples from all potentially exposed individuals may be precluded, and high-throughput bioassays capable of rapid and individualized dose assessment several days post-exposure will be essential for population triage and efficient implementation of medical treatment. The objective of this work was to validate the performance of a biomarker panel of radiosensitive intracellular leukocyte proteins (ACTN1, DDB2, and FDXR) and blood cell counts (CD19+ B-cells and CD3+ T-cells) for retrospective classification of exposure and dose estimation up to 7 days post-exposure in an in-vivo C57BL/6 mouse model. Juvenile and adult C57BL/6 mice of both sexes were total body irradiated with 0, 1, 2, 3, or 4 Gy, peripheral blood was collected 1, 4, and 7-days post-exposure, and individual blood biomarkers were quantified by imaging flow cytometry. An ensemble machine learning platform was used to identify the strongest predictor variables and combine them for biodosimetry outputs. This approach generated successful exposure classification (ROC AUC = 0.94, 95% CI: 0.90-0.97) and quantitative dose reconstruction (R

Indexed as

BiomarkersMachine LearningMice, Inbred C57BLRadiometryAnimalsFemaleMaleMiceWhole-Body IrradiationBiomarkers

Identifiers

PMID39396080
PMCPMC11470949

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.