Evidence map›Paper›PMID 39402925›Full record

ArticleClinical and translational science2024

Pharmacogenomic augmented machine learning in electronic health record alerts: A health system-wide usability survey of clinicians.

Caroline W Grant, Jean Marrero-Polanco, Jeremiah B Joyce, Barbara Barry, Ashley Stillwell, Kellie Kruger, Therese Anderson, Heather Talley, Mary Hedges, Jose Valery and 6 more

Abstract read
In one paragraph

Article in Clinical and translational science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Caroline W GrantDepartment of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0001-9342-2138
Jean Marrero-PolancoDepartment of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0003-2232-0788
Jeremiah B JoyceDepartment of Psychiatry and Psychology, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0002-4367-6380
Barbara BarryDivision of Health Care Delivery Research, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0002-0755-6939
Ashley StillwellDepartment of Family Medicine, Mayo Clinic, Scottsdale, Arizona, USA.ORCID 0000-0003-0409-8618
Kellie KrugerDepartment of Family Medicine, Mayo Clinic, Scottsdale, Arizona, USA.
Therese AndersonDepartment of Family Medicine, Mayo Clinic, Jacksonville, Florida, USA.ORCID 0000-0003-3228-0388
Heather TalleyDepartment of Family Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Mary HedgesDepartment of Internal Medicine, Mayo Clinic, Jacksonville, Florida, USA.ORCID 0000-0002-3487-916X
Jose ValeryDepartment of Internal Medicine, Mayo Clinic, Jacksonville, Florida, USA.ORCID 0000-0003-2671-7854
Richard WhiteDepartment of Internal Medicine, Mayo Clinic, Jacksonville, Florida, USA.ORCID 0000-0002-1133-7819
Richard R SharpBiomedical Ethics Research Program, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0001-5441-2084
Paul E CroarkinDepartment of Psychiatry and Psychology, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0001-6843-6503
Liselotte N DyrbyeDepartment of Medicine, University of Colorado School of Medicine, Denver, Colorado, USA.ORCID 0000-0002-7820-704X
William V BoboDepartment of Behavioral Science & Social Medicine, Florida State University College of Medicine, Tallahassee, Florida, USA.ORCID 0000-0002-5674-3079
Arjun P AthreyaDepartment of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic, Rochester, Minnesota, USA.ORCID 0000-0001-9764-1768

Funding

Harry C. and Debra A. Stonecipher Predoctoral Fellowship (CWG) at the Mayo Clinic Graduate School of Biomedical SciencesNational Institutes of Health Predoctoral T32 Fellowship GM144233National Science Foundation IIS-2041339
6 · The paper itself

Abstract

Pharmacogenomic (PGx) biomarkers integrated using machine learning can be embedded within the electronic health record (EHR) to provide clinicians with individualized predictions of drug treatment outcomes. Currently, however, drug alerts in the EHR are largely generic (not patient-specific) and contribute to increased clinician stress and burnout. Improving the usability of PGx alerts is an urgent need. Therefore, this work aimed to identify principles for optimal PGx alert design through a health-system-wide, mixed-methods study. Clinicians representing multiple practices and care settings (N = 1062) in urban, rural, and underserved regions were invited to complete an electronic survey comparing the usability of three drug alerts for citalopram, as a case study. Alert 1 contained a generic warning of pharmacogenomic effects on citalopram metabolism. Alerts 2 and 3 provided patient-specific predictions of citalopram efficacy with varying depth of information. Primary outcomes included the System's Usability Scale score (0-100 points) of each alert, the perceived impact of each alert on stress and decision-making, and clinicians' suggestions for alert improvement. Secondary outcomes included the assessment of alert preference by clinician age, practice type, and geographic setting. Qualitative information was captured to provide context to quantitative information. The final cohort comprised 305 geographically and clinically diverse clinicians. A simplified, individualized alert (Alert 2) was perceived as beneficial for decision-making and stress compared with a more detailed version (Alert 3) and the generic alert (Alert 1) regardless of age, practice type, or geographic setting. Findings emphasize the need for clinician-guided design of PGx alerts in the era of digital medicine.

Indexed as

CitalopramElectronic Health RecordsMachine LearningPharmacogeneticsAdultFemaleHumansMaleMedical Order Entry SystemsMiddle AgedPhysiciansSurveys and QuestionnairesCitalopram

Identifiers

PMID39402925
PMCPMC11473792

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.