Evidence map›Paper›PMID 39404392›Full record

ArticleCells2024

Do Perineuronal Nets Stabilize the Engram of a Synaptic Circuit?

Varda Lev-Ram, Sakina Palida Lemieux, Thomas J Deerinck, Eric A Bushong, Alex J Perez, Denise R Pritchard, Brandon H Toyama, Sung Kyu R Park, Daniel B McClatchy, Jeffrey N Savas and 5 more

Abstract read
In one paragraph

Article in Cells, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. The Role of Meprins on the Brain Extracellular Matrix and Perineuronal Nets.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  4. Reductionism in Engram Neuroscience.The European journal of neuroscience · 2026
    Review
  5. Review
  6. Review
  7. Critical Periods and Beyond: Dynamic Functions of Perineuronal Nets in Cognition, Development, and Disease.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Review
  8. Role of CPEBs in Learning and Memory.Journal of neurochemistry · 2025
    Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Varda Lev-RamDepartment of Pharmacology, University of California San Diego, CA 92093, USA.ORCID 0000-0001-7649-0550
Sakina Palida LemieuxDepartment of Pharmacology, University of California San Diego, CA 92093, USA.ORCID 0000-0001-8143-5839
Thomas J DeerinckNational Center for Microscopy and Imaging Research, University of California San Diego, La Jolla, CA 92093, USA.
Eric A BushongNational Center for Microscopy and Imaging Research, University of California San Diego, La Jolla, CA 92093, USA.ORCID 0000-0001-6195-2433
Alex J PerezNational Center for Microscopy and Imaging Research, University of California San Diego, La Jolla, CA 92093, USA.
Denise R PritchardDepartment of Pharmacology, University of California San Diego, CA 92093, USA.
Brandon H ToyamaMolecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA.ORCID 0000-0002-8355-9138
Sung Kyu R ParkDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Daniel B McClatchyDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Jeffrey N SavasDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.ORCID 0000-0002-8173-5580
Michael WhitneyDepartment of Pharmacology, University of California San Diego, CA 92093, USA.
Stephen R AdamsDepartment of Pharmacology, University of California San Diego, CA 92093, USA.
Mark H EllismanNational Center for Microscopy and Imaging Research, University of California San Diego, La Jolla, CA 92093, USA.ORCID 0000-0001-8893-8455
John YatesDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Roger Y TsienDepartment of Pharmacology, University of California San Diego, CA 92093, USA.

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI YATES III, JOHN R · 2012 to 2021
$20.7M
IVEM and Image Analysis ResourceP41GM103412 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ELLISMAN, MARK H · 2012 to 2019
$17.9M
Quantitative Proteome Analysis of Brain DevelopmentR01MH067880 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2003 to 2017
$7.1M
DYNAMICS OF SIGNAL TRANSDUCTION IN NEURONSR01NS027177 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADAMS, STEPHEN ROY, ELLISMAN, MARK H · 1989 to 2017
$5.8M
DYNAMICS OF SIGNAL TRANSDUCTION IN NEURONSR37NS027177 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TSIEN, ROGER Y · 2007 to 2013
$4.8M
Proteome Biology of Noise Induced Hearing LossR00DC013805 · NIDCD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SAVAS, JEFFREY NICHOLAS · 2015 to 2017
$747k
Quantitative Proteomic Approach to Identify the Mechanism of Alzheimer's DiseaseF32AG039127 · NIA · SCRIPPS RESEARCH INSTITUTE, THE · PI SAVAS, JEFFREY NICHOLAS · 2011 to 2014
$117k
NIA NIH HHS F32 AG039127NIDCD NIH HHS R00 DC013805NIGMS NIH HHS P41 GM103412NIGMS NIH HHS P41 GM103533NIH HHS F32AG039127NIH HHS P41 GM 103533NIH HHS R00DC013805NIH HHS R01 MH-067880NIMH NIH HHS R01 MH067880NINDS NIH HHS 5R01NS027177-27NINDS NIH HHS R01 NS027177NINDS NIH HHS R37 NS027177
6 · The paper itself

Abstract

Perineuronal nets (PNNs), a specialized form of extra cellular matrix (ECM), surround numerous neurons in the CNS and allow synaptic connectivity through holes in its structure. We hypothesize that PNNs serve as gatekeepers that guard and protect synaptic territory and thus may stabilize an engram circuit. We present high-resolution and 3D EM images of PNN-engulfed neurons in mice brains, showing that synapses occupy the PNN holes and that invasion of other cellular components is rare. PNN constituents in mice brains are long-lived and can be eroded faster in an enriched environment, while synaptic proteins have a high turnover rate. Preventing PNN erosion by using pharmacological inhibition of PNN-modifying proteases or matrix metalloproteases 9 (MMP9) knockout mice allowed normal fear memory acquisition but diminished long-term memory stabilization, supporting the above hypothesis.

Indexed as

Extracellular MatrixNeuronsSynapsesAnimalsBrainFearMatrix Metalloproteinase 9MiceMice, Inbred C57BLMice, KnockoutNerve NetMatrix Metalloproteinase 9fear conditioninglife-long-memoryperineuronal netsSBEMSILAM

Identifiers

PMID39404392
PMCPMC11476018

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.