Evidence map›Paper›PMID 39404738›Full record

ArticleThe Journal of cell biology2025

Rapid turnover of CTLA4 is associated with a complex architecture of reversible ubiquitylation.

Pei Yee Tey, Almut Dufner, Klaus-Peter Knobeloch, Jonathan N Pruneda, Michael J Clague, Sylvie Urbé

Abstract read
In one paragraph

Article in The Journal of cell biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
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  9. Article
  10. Review
  11. Proteostasis of immune checkpoint receptors.The Biochemical journal · 2025
    Review
  12. Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Pei Yee TeyBiochemistry, Cell and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool , Liverpool, UK.ORCID 0000-0002-8149-9717
Almut DufnerInstitute of Neuropathology, Medical Faculty, University of Freiburg , Freiburg, Germany.ORCID 0000-0002-9950-0691
Klaus-Peter KnobelochInstitute of Neuropathology, Medical Faculty, University of Freiburg , Freiburg, Germany.ORCID 0000-0003-1587-1944
Jonathan N PrunedaDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University, Portland, USA.ORCID 0000-0002-0304-4418
Michael J ClagueBiochemistry, Cell and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool , Liverpool, UK.ORCID 0000-0003-3355-9479
Sylvie UrbéBiochemistry, Cell and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool , Liverpool, UK.ORCID 0000-0003-4735-9814

Funding

Exploiting bacterial effector proteins to study human ubiquitin signalingR35GM142486 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI Jonathan N Pruneda · 2021 to 2026
$2.6M
Deutsche Forschungsgemeinschaft 390939984NIGMS NIH HHS R35 GM142486NIGMS NIH HHS R35GM142486Royal Society INF\R2\212031Wellcome TrustWellcome Trust 102172/B/13/Z
6 · The paper itself

Abstract

The immune checkpoint regulator CTLA4 is an unusually short-lived membrane protein. Here, we show that its lysosomal degradation is dependent on ubiquitylation at lysine residues 203 and 213. Inhibition of the v-ATPase partially restores CTLA4 levels following cycloheximide treatment, but also reveals a fraction that is secreted in exosomes. The endosomal deubiquitylase, USP8, interacts with CTLA4, and its loss enhances CTLA4 ubiquitylation in cancer cells, mouse CD4+ T cells, and cancer cell-derived exosomes. Depletion of the USP8 adapter protein, HD-PTP, but not ESCRT-0 recapitulates this cellular phenotype but shows distinct properties vis-à-vis exosome incorporation. Re-expression of wild-type USP8, but neither a catalytically inactive nor a localization-compromised ΔMIT domain mutant can rescue delayed degradation of CTLA4 or counteract its accumulation in clustered endosomes. UbiCRest analysis of CTLA4-associated ubiquitin chain linkages identifies a complex mixture of conventional Lys63- and more unusual Lys27- and Lys29-linked polyubiquitin chains that may underly the rapidity of protein turnover.

Indexed as

CTLA-4 AntigenUbiquitinationAnimalsCD4-Positive T-LymphocytesEndosomal Sorting Complexes Required for TransportEndosomesHEK293 CellsHumansLysineLysosomesMiceProteolysisUbiquitin ThiolesteraseCTLA-4 AntigenCTLA4 protein, humanCtla4 protein, mouseEndosomal Sorting Complexes Required for TransportLysineUbiquitin Thiolesterase

Identifiers

PMID39404738
PMCPMC11486831

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.