Evidence map›Paper›PMID 39415013›Full record

ArticleNature2024

An ancient ecospecies of Helicobacter pylori.

Elise Tourrette, Roberto C Torres, Sarah L Svensson, Takashi Matsumoto, Muhammad Miftahussurur, Kartika Afrida Fauzia, Ricky Indra Alfaray, Ratha-Korn Vilaichone, Vo Phuoc Tuan, Helicobacter Genomics Consortium and 7 more

Abstract read
In one paragraph

Article in Nature, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. International journal of chronic obstructive pulmonary disease · 2026
    Pooled it
  2. Microbiology and molecular biology reviews : MMBR · 2026
    Review
  3. Biomolecules · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. A single-center culture-based study ofFrontiers in microbiology · 2026
    Article
  8. Review
  9. Progress in immunotherapy forFrontiers in cellular and infection microbiology · 2026
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Evolution and ecology of commensal gut protists: recent advances.Current opinion in genetics & development · 2025
    Review
  16. Global diversity of integrating conjugative elements (ICEs) inbioRxiv : the preprint server for biology · 2025
    Article
  17. ThemBio · 2025
    Article
  18. Article
  19. Population structure ofJournal of clinical microbiology · 2025
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Elise TourretteShanghai Institute of Immunity and Infection, Chinese Academy of Sciences, Shanghai, China.ORCID 0000-0002-0822-5330
Roberto C TorresShanghai Institute of Immunity and Infection, Chinese Academy of Sciences, Shanghai, China.ORCID 0000-0001-6990-9114
Sarah L SvenssonShanghai Institute of Immunity and Infection, Chinese Academy of Sciences, Shanghai, China.ORCID 0000-0002-3183-6084
Takashi MatsumotoDepartment of Environmental and Preventive Medicine, Oita University Faculty of Medicine, Yufu, Japan.ORCID 0000-0002-6899-1686
Muhammad MiftahussururUniversitas Airlangga, Surabaya, Indonesia.ORCID 0000-0003-1415-6033
Kartika Afrida FauziaDepartment of Environmental and Preventive Medicine, Oita University Faculty of Medicine, Yufu, Japan.
Ricky Indra AlfarayDepartment of Environmental and Preventive Medicine, Oita University Faculty of Medicine, Yufu, Japan.ORCID 0000-0001-7721-9455
Ratha-Korn VilaichoneGastroenterology Unit, Department of Medicine and Center of Excellence in Digestive Diseases, Thammasat University, Bangkok, Thailand.
Vo Phuoc TuanDepartment of Environmental and Preventive Medicine, Oita University Faculty of Medicine, Yufu, Japan.
Helicobacter Genomics Consortium
Difei WangCancer Genomics Research Lab, Frederick National Lab for Cancer Research, Rockville, MD, USA.ORCID 0000-0003-4088-3859
Abbas YadegarFoodborne and Waterborne Diseases Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.ORCID 0000-0002-2135-7581
Lisa M OlssonThe Wallenberg Laboratory, Department of Molecular and Clinical Medicine, Institute of Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.ORCID 0000-0001-9730-1915
Zhemin ZhouPasteurien College, Suzhou Medical College, Soochow University, Suzhou, China.ORCID 0000-0001-9783-0366
Yoshio YamaokaDepartment of Environmental and Preventive Medicine, Oita University Faculty of Medicine, Yufu, Japan. yyamaoka@oita-u.ac.jp.ORCID 0000-0002-1222-5819
Kaisa ThorellDepartment of Chemistry and Molecular Biology, Faculty of Science, University of Gothenburg, Gothenburg, Sweden. kaisa.thorell@gu.se.ORCID 0000-0002-4447-8968
Daniel FalushShanghai Institute of Immunity and Infection, Chinese Academy of Sciences, Shanghai, China. daniel.falush@ips.ac.cn.ORCID 0000-0002-2956-0795

Funding

WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6M
NCI NIH HHS 75N91019D00024Wellcome Trust
6 · The paper itself

Abstract

Helicobacter pylori disturbs the stomach lining during long-term colonization of its human host, with sequelae including ulcers and gastric cancer

Indexed as

Evolution, MolecularHelicobacter pyloriPolymorphism, Single NucleotideAmericasAnimalsBacterial Outer Membrane ProteinsBacterial ProteinsGenes, BacterialGenome, BacterialHelicobacter InfectionsHistory, AncientHost Microbial InteractionsHuman MigrationHumansIndigenous PeoplesIronBacterial Outer Membrane ProteinsBacterial ProteinsIronUreaseVacA protein, Helicobacter pyloriVirulence Factors

Identifiers

PMID39415013
PMCPMC11541087

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.