Evidence map›Paper›PMID 39416041›Full record

ArticlebioRxiv : the preprint server for biology2024

Cryo-electron tomography reveals coupled flavivirus replication, budding and maturation.

Selma Dahmane, Erin Schexnaydre, Jianguo Zhang, Ebba Rosendal, Nunya Chotiwan, Bina Kumari Singh, Wai-Lok Yau, Richard Lundmark, Benjamin Barad, Danielle A Grotjahn and 4 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Selma DahmaneDepartment of Medical Biochemistry and Biophysics, Umeå University, Sweden.ORCID 0000-0003-4193-1496
Erin SchexnaydreDepartment of Medical Biochemistry and Biophysics, Umeå University, Sweden.ORCID 0000-0002-2993-8647
Jianguo ZhangDepartment of Medical Biochemistry and Biophysics, Umeå University, Sweden.ORCID 0000-0002-3784-6515
Ebba RosendalThe Laboratory for Molecular Infection Medicine Sweden (MIMS), Umeå University, Sweden.ORCID 0000-0001-8512-0535
Nunya ChotiwanThe Laboratory for Molecular Infection Medicine Sweden (MIMS), Umeå University, Sweden.ORCID 0000-0003-3214-6605
Bina Kumari SinghDepartment of Medical Biochemistry and Biophysics, Umeå University, Sweden.ORCID 0000-0002-9500-2759
Wai-Lok YauThe Laboratory for Molecular Infection Medicine Sweden (MIMS), Umeå University, Sweden.ORCID 0009-0007-0386-3919
Richard LundmarkThe Laboratory for Molecular Infection Medicine Sweden (MIMS), Umeå University, Sweden.ORCID 0000-0001-9104-724X
Benjamin BaradDepartment of Chemical Physiology and Biochemistry, Oregon Health & Science University, USA.ORCID 0000-0002-1016-862X
Danielle A GrotjahnDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, USA.ORCID 0000-0001-5908-7882
Susanne LieseInstitute of Physics, University of Augsburg, Germany.ORCID 0000-0001-7420-5488
Andreas CarlsonDepartment of Mathematics, University of Oslo, Norway.ORCID 0000-0002-3068-9983
Anna K ÖverbyThe Laboratory for Molecular Infection Medicine Sweden (MIMS), Umeå University, Sweden.ORCID 0000-0001-6553-0940
Lars-Anders CarlsonDepartment of Medical Biochemistry and Biophysics, Umeå University, Sweden.ORCID 0000-0003-2342-6488

Funding

Defining Endoplasmic Reticulum Stress-Development Mitochondria RemodelingRF1NS125674 · NINDS · SCRIPPS RESEARCH INSTITUTE, THE · PI WISEMAN, ROCKLAND LUKE · 2022 to 2022
$2.4M
NINDS NIH HHS RF1 NS125674
6 · The paper itself

Abstract

Flaviviruses replicate their genomes in replication organelles (ROs) formed as bud-like invaginations on the endoplasmic reticulum (ER) membrane, which also functions as the site for virion assembly. While this localization is well established, it is not known to what extent viral membrane remodeling, genome replication, virion assembly, and maturation are coordinated. Here, we imaged tick-borne flavivirus replication in human cells using cryo-electron tomography. We find that the RO membrane bud is shaped by a combination of a curvature-establishing coat and the pressure from intraluminal template RNA. A protein complex at the RO base extends to an adjacent membrane, where immature virions bud. Naturally occurring furin site variants determine whether virions mature in the immediate vicinity of ROs. We further visualize replication in mouse brain tissue by cryo-electron tomography. Taken together, these findings reveal a close spatial coupling of flavivirus genome replication, budding, and maturation.

Identifiers

PMID39416041
PMCPMC11482891

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.