Evidence map›Paper›PMID 39419988›Full record

ArticleNature communications2024

Serological analysis in humans in Malaysian Borneo suggests prior exposure to H5 avian influenza near migratory shorebird habitats.

Hannah Klim, Timothy William, Jack Mellors, Caolann Brady, Giri S Rajahram, Tock H Chua, Helena Brazal Monzó, Jecelyn Leslie John, Kelly da Costa, Mohammad Saffree Jeffree and 7 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Hannah KlimNuffield Department of Medicine, Centre for Human Genetics and Pandemic Sciences Institute, University of Oxford, Oxford, UK. hannah.klim@ndm.ox.ac.uk.ORCID 0000-0002-7655-6449
Timothy WilliamInfectious Diseases Society Sabah-Menzies School of Health Research Clinical Research Unit, Kota Kinabalu, Malaysia.
Jack MellorsNuffield Department of Medicine, Centre for Human Genetics and Pandemic Sciences Institute, University of Oxford, Oxford, UK.
Caolann BradyNuffield Department of Medicine, Centre for Human Genetics and Pandemic Sciences Institute, University of Oxford, Oxford, UK.
Giri S RajahramClinical Research Centre, Queen Elizabeth II Hospital, Kota Kinabalu, Malaysia.ORCID 0000-0002-8123-476X
Tock H ChuaFaculty of Medicine and Health Sciences, University of Malaysia Sabah, Kota Kinabalu, Malaysia.ORCID 0000-0002-8984-8723
Helena Brazal MonzóFaculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, UK.
Jecelyn Leslie JohnBorneo Medical and Health Research Centre, Faculty of Medicine and Health Sciences, University of Malaysia Sabah, Kota Kinabalu, Malaysia.
Kelly da CostaViral Pseudotype Unit, Medway School of Pharmacy, Universities of Kent and Medway, Kent, UK.ORCID 0000-0001-6352-3843
Mohammad Saffree JeffreeDepartment of Public Health Medicine, Faculty of Medicine and Health Sciences, University of Malaysia Sabah, Kota Kinabalu, Malaysia.ORCID 0000-0002-0373-4451
Nigel J TempertonViral Pseudotype Unit, Medway School of Pharmacy, Universities of Kent and Medway, Kent, UK.ORCID 0000-0002-7978-3815
Tom TiptonNuffield Department of Medicine, Centre for Human Genetics and Pandemic Sciences Institute, University of Oxford, Oxford, UK.
Craig P ThompsonDivision of Biomedical Sciences, Warwick Medical School, University of Warwick, Coventry, UK.ORCID 0000-0001-9248-9365
Kamruddin AhmedBorneo Medical and Health Research Centre, Faculty of Medicine and Health Sciences, University of Malaysia Sabah, Kota Kinabalu, Malaysia.ORCID 0000-0002-1869-3701
Chris J DrakeleyFaculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, UK.ORCID 0000-0003-4863-075X
Miles W CarrollNuffield Department of Medicine, Centre for Human Genetics and Pandemic Sciences Institute, University of Oxford, Oxford, UK.ORCID 0000-0002-7026-7187
Kimberly M FornaceFaculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, UK. kfornace@nus.edu.sg.

Funding

Royal Society 221963/Z/20/ZU.S. Department of Health & Human Services | U.S. Food and Drug Administration (U.S. Food & Drug Administration) 75F40120C00085Wellcome TrustWellcome Trust (Wellcome) 221963/Z/20/Z
6 · The paper itself

Abstract

Cases of H5 highly pathogenic avian influenzas (HPAI) are on the rise. Although mammalian spillover events are rare, H5N1 viruses have an estimated mortality rate in humans of 60%. No human cases of H5 infection have been reported in Malaysian Borneo, but HPAI has circulated in poultry and migratory avian species transiting through the region. Recent deforestation in coastal habitats in Malaysian Borneo may increase the proximity between humans and migratory birds. We hypothesise that higher rates of human-animal contact, caused by this habitat destruction, will increase the likelihood of potential zoonotic spillover events. In 2015, an environmentally stratified cross-sectional survey was conducted collecting geolocated questionnaire data in 10,100 individuals. A serological survey of these individuals reveals evidence of H5 neutralisation that persisted following depletion of seasonal H1/H3 HA binding antibodies from the plasma. The presence of these antibodies suggests that some individuals living near migratory sites may have been exposed to H5 HA. There is a spatial and environmental overlap between individuals displaying high H5 HA binding and the distribution of migratory birds. We have developed a novel surveillance approach including both spatial and serological data to detect potential spillover events, highlighting the urgent need to study cross-species pathogen transmission in migratory zones.

Indexed as

Animal MigrationAntibodies, ViralBirdsEcosystemInfluenza A Virus, H5N1 SubtypeInfluenza, HumanInfluenza in BirdsAdultAnimalsBorneoCross-Sectional StudiesFemaleHumansMalaysiaMaleMiddle AgedAntibodies, Viral

Identifiers

PMID39419988
PMCPMC11487116

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.