Evidence map›Paper›PMID 39424841›Full record

ArticleScientific reports2024

NopP2 effector of Bradyrhizobium elkanii USDA61 is a determinant of nodulation in Vigna radiata cultivars.

Pongdet Piromyou, Natcha Pruksametanan, Hien P Nguyen, Pongpan Songwattana, Jenjira Wongdee, Phongkeat Nareephot, Teerana Greetatorn, Kamonluck Teamtisong, Panlada Tittabutr, Nantakorn Boonkerd and 4 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Pongdet Piromyou *Institute of Research and Development, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Natcha Pruksametanan *School of Biotechnology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Hien P Nguyen *Institute of Global Innovation Research (IGIR), Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo, 183-8538, Japan.
Pongpan SongwattanaInstitute of Research and Development, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Jenjira WongdeeInstitute of Research and Development, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Phongkeat NareephotSchool of Biotechnology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Teerana GreetatornInstitute of Research and Development, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Kamonluck TeamtisongThe Center for Scientific and Technological Equipment, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Panlada TittabutrSchool of Biotechnology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Nantakorn BoonkerdSchool of Biotechnology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand.
Shusei SatoGraduate School of Life Sciences, Tohoku University, Sendai, 980-8577, Japan.
Pakpoom BoonchuenSchool of Biotechnology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand. pakpoom.b@sut.ac.th.
Shin OkazakiInstitute of Global Innovation Research (IGIR), Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo, 183-8538, Japan. sokazaki@cc.tuat.ac.jp.
Neung TeaumroongSchool of Biotechnology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand. neung@sut.ac.th.

Funding

JSPS-NRCT by National Research Council of Thailand grant number N11A670769NSRF via the Program Management Unit for Human Resources & Institutional Development, Research, and Innovation B13F660055Thailand Science Research and Innovation (TSRI) and National Science Research and Innovation Fund (NSRF) grant number 195582
6 · The paper itself

Abstract

The symbiotic relationship between legumes and rhizobia is known to be influenced by specific rhizobial type III effectors (T3Es) in certain cases. In this study, we present evidence that the symbiosis between Vigna radiata and Bradyrhizobium elkanii USDA61 is controlled by a T3E called NopP2, and this interaction is highly dependent on the genetic makeup of the host plant. NopP2 plays a crucial role in promoting nodulation in various V. radiata varieties. Additionally, NopP2 is essential for early infection and the formation of nodules in compatible plants. Through evolutionary analysis, we discovered that bradyrhizobial NopPs can be categorized into two distinct clusters: NopP1 and NopP2. Furthermore, both types of bradyrhizobial NopPs were conserved within their respective groups. Our findings suggest that NopP2 serves as a mechanism for optimizing the symbiotic relationship between V. radiata and B. elkanii USDA61 by interacting with the pathogenesis related-10 (PR10) protein and reducing effector-triggered immunity (ETI) responses.

Indexed as

BradyrhizobiumPlant Root NodulationSymbiosisVignaBacterial ProteinsPhylogenyPlant ProteinsBacterial ProteinsPlant ProteinsBradyrhizobium elkanii USDA61Effector protein NopPPathogenesis related-10 (PR10) proteinT3SSVigna radiata

Identifiers

PMID39424841
PMCPMC11489812

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.