Evidence map›Paper›PMID 39428471›Full record

ArticleJournal of experimental & clinical cancer research : CR2024

MCPIP1 modulates the miRNA‒mRNA landscape in keratinocyte carcinomas.

Agata Lichawska-Cieslar, Weronika Szukala, Guillem Ylla, Gabriela Machaj, Faustyna Ploskonka, Iwona Chlebicka, Jacek C Szepietowski, Jolanta Jura

Abstract read
In one paragraph

Article in Journal of experimental & clinical cancer research : CR, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. The Role of MCPIP1 in Macrophage Polarization and Cardiac Function Post-Myocardial Infarction.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Agata Lichawska-CieslarFaculty of Biochemistry, Biophysics and Biotechnology, Department of General Biochemistry, Jagiellonian University, Gronostajowa 7, Krakow, 30-387, Poland.
Weronika SzukalaFaculty of Biochemistry, Biophysics and Biotechnology, Department of General Biochemistry, Jagiellonian University, Gronostajowa 7, Krakow, 30-387, Poland.
Guillem YllaFaculty of Biochemistry, Biophysics and Biotechnology, Laboratory of Bioinformatics and Genome Biology, Jagiellonian University, Gronostajowa 7, Krakow, 30-387, Poland.
Gabriela MachajFaculty of Biochemistry, Biophysics and Biotechnology, Laboratory of Bioinformatics and Genome Biology, Jagiellonian University, Gronostajowa 7, Krakow, 30-387, Poland.
Faustyna PloskonkaFaculty of Biochemistry, Biophysics and Biotechnology, Department of General Biochemistry, Jagiellonian University, Gronostajowa 7, Krakow, 30-387, Poland.
Iwona ChlebickaDepartment of Dermatology, Venereology and Allergology, Wroclaw Medical University, Chalubinskiego 1, Wroclaw, 50-368, Poland.
Jacek C SzepietowskiDepartment of Dermatology, Venereology and Allergology, Wroclaw Medical University, Chalubinskiego 1, Wroclaw, 50-368, Poland.
Jolanta JuraFaculty of Biochemistry, Biophysics and Biotechnology, Department of General Biochemistry, Jagiellonian University, Gronostajowa 7, Krakow, 30-387, Poland. jolanta.jura@uj.edu.pl.ORCID http://orcid.org/0000-0002-0816-3475

Funding

Narodowe Centrum Nauki 2021/41/B/NZ5/03601
6 · The paper itself

Abstract

backgroundMonocyte Chemotactic Protein 1-Induced Protein 1 (MCPIP1, also called Regnase-1) is a negative modulator of inflammation with tumor-suppressive properties. Mice with keratinocyte-specific deletion of the Zc3h12a gene, encoding MCPIP1, (Mcpip1

methodsThe aim of this study was to investigate the MCPIP1 RNase-dependent microRNA (miRNA)‒mRNA regulatory network in chemically induced squamous cell carcinoma (SCC)-like skin papillomas. Next-generation sequencing (NGS) coupled with bioinformatic analysis was used to shortlist the MCPIP1-dependent changes in protein-coding genes and miRNAs. The expression levels of the selected miRNAs were analyzed by quantitative PCR in human keratinocytes with MCPIP1 silencing. Functional studies were performed in human keratinocytes transfected with appropriate miRNA mimics. The DIANA-microT-CDS algorithm and DIANA-TarBase v7 database were used to predict potential target genes and identify the experimentally validated targets of differentially expressed (DE) miRNAs.

resultsRNA sequencing (RNA-Seq) analysis of control and Mcpip1

conclusionsLoss of MCPIP1 modulates the expression profiles of 33 miRNAs in chemically induced Mcpip1

Indexed as

KeratinocytesMicroRNAsRibonucleasesRNA, MessengerSkin NeoplasmsTranscription FactorsAnimalsCarcinoma, Squamous CellGene Expression Regulation, NeoplasticHumansMiceMicroRNAsRibonucleasesRNA, MessengerTranscription FactorsZC3H12A protein, humanZc3h12a protein, mouseKeratinocytesMCPIP1miRNARegnase-1SCCSkin cancerTranscriptomics

Identifiers

PMID39428471
PMCPMC11492624

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.