Evidence map›Paper›PMID 39432785›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Substrate specificity controlled by the exit site of human P4-ATPases, revealed by de novo point mutations in neurological disorders.

David C Calianese, Tomoyasu Noji, Jennifer A Sullivan, Kelly Schoch, Vandana Shashi, Vanda McNiven, Luiza Lorena Pires Ramos, Albena Jordanova, Judit Kárteszi, Hiroshi Ishikita and 1 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Trial
  2. Review
  3. Article
  4. The danger of flipping an outside lipid to the inside.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

David C Calianese *Laboratory of Biochemistry and Immunology, World Premier International Research Center, Immunology Frontier Research Center, Osaka University, Suita, Osaka 565-0871, Japan.
Tomoyasu Noji *Theoretical Chemistry, Research Center for Advanced Science and Technology, The University of Tokyo, Tokyo 153-8904, Japan.ORCID 0000-0001-9468-2038
Jennifer A SullivanDivision of Medical Genetics, Department of Pediatrics, Duke University School of Medicine, Durham, NC 27705.
Kelly SchochDivision of Medical Genetics, Department of Pediatrics, Duke University School of Medicine, Durham, NC 27705.
Vandana ShashiDivision of Medical Genetics, Department of Pediatrics, Duke University School of Medicine, Durham, NC 27705.
Vanda McNivenFred A Litwin Family Centre in Genetic Medicine, University Health Network, Toronto, ON M5T 3L9, Canada.
Luiza Lorena Pires RamosMolecular Neurogenomics group, Vlaams Instituut voor Biotechnologie Center for Molecular Neurology, Vlaams Instituut voor Biotechnologie, Antwerp 2610, Belgium.
Albena JordanovaMolecular Neurogenomics group, Vlaams Instituut voor Biotechnologie Center for Molecular Neurology, Vlaams Instituut voor Biotechnologie, Antwerp 2610, Belgium.
Judit KártesziGenetic Counselling, St. Raphael Hospital of Zala Castle-county, Zalaegerszeg 8900, Hungary.
Hiroshi IshikitaTheoretical Chemistry, Research Center for Advanced Science and Technology, The University of Tokyo, Tokyo 153-8904, Japan.ORCID 0000-0002-5849-8150
Shigekazu NagataLaboratory of Biochemistry and Immunology, World Premier International Research Center, Immunology Frontier Research Center, Osaka University, Suita, Osaka 565-0871, Japan.ORCID 0000-0001-9758-8426

Funding

Fonds Wetenschappelijk Onderzoek (FWO) G048220NFonds Wetenschappelijk Onderzoek (FWO) G0A2122NMEXT | Japan Society for the Promotion of Science (JSPS) 15H05785MEXT | Japan Society for the Promotion of Science (JSPS) 21H04770MEXT | Japan Society for the Promotion of Science (JSPS) 23H02444
6 · The paper itself

Abstract

The maintenance of lipid asymmetry on the plasma membrane is regulated by flippases, such as ATP8A2, ATP11A, and ATP11C, which translocate phosphatidylserine and phosphatidylethanolamine from the outer leaflet to the inner leaflet. We previously identified a patient-derived point mutation (Q84E) in ATP11A at the phospholipid entry site, which acquired the ability to flip phosphatidylcholine (PtdCho). This mutation led to elevated levels of sphingomyelin (SM) in the outer leaflet of the plasma membrane. We herein present two de novo ATP11A dominant mutations (E114G and S399L) in heterozygous patients exhibiting neurological and developmental disorders. These mutations, situated near the predicted phospholipid exit site, similarly confer the ability for ATP11A to recognize PtdCho as a substrate, resulting in its internalization into cells. Cells expressing these mutants had increased SM levels on their surface, attributed to the up-regulated expression of the

Indexed as

Adenosine TriphosphatasesNervous System DiseasesPoint MutationCell MembraneHumansPhosphatidylcholinesPhospholipid Transfer ProteinsSphingomyelinsSubstrate SpecificityAdenosine TriphosphatasesPhosphatidylcholinesPhospholipid Transfer ProteinsSphingomyelinsflippaseneurological disorderplasma membranepoint mutationsphingomyelin

Identifiers

PMID39432785
PMCPMC11536178

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.