Evidence map›Paper›PMID 39433989›Full record

ArticleBMC cancer2024

Clinical impact of large genomic explorations at diagnosis in 198 pediatric solid tumors: a monocentric study aiming practical feasibility of precision oncology.

Juliette Simon, Damien Reita, Eric Guerin, Benoit Lhermitte, Noelle Weingertner, François Lefebvre, Marie Karanian, Julien Masliah-Planchon, Veronique Lindner, Alina Onea and 7 more

Abstract read
In one paragraph

Article in BMC cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Juliette SimonPediatric Onco-Hematology Department, University Hospitals of Strasbourg, 1 Avenue Molière, Strasbourg, France.
Damien ReitaDepartment of Cancer Molecular Genetics, Laboratory of Biochemistry and Molecular Biology, University Hospitals of Strasbourg, Strasbourg, France.
Eric GuerinDepartment of Cancer Molecular Genetics, Laboratory of Biochemistry and Molecular Biology, University Hospitals of Strasbourg, Strasbourg, France.
Benoit LhermitteLaboratory of Bioimaging and Pathologies - Team OnKO-3T - Translational, Transversal and Therapeutic Oncology - UMR CNRS 7021, University of Strasbourg, Strasbourg, France.
Noelle WeingertnerDepartment of Pathology, University Hospitals of Strasbourg, Strasbourg, France.
François LefebvrePublic Health Unit, University Hospitals of Strasbourg, Strasbourg, France.
Marie KaranianDepartment of Biopathology, Léon Berard Center, Lyon, France.
Julien Masliah-PlanchonCurie Institute, Cancer Center, Paris, France.
Veronique LindnerDepartment of Pathology, University Hospitals of Strasbourg, Strasbourg, France.
Alina OneaDepartment of Pathology, University Hospitals of Strasbourg, Strasbourg, France.
Sarah JannierPediatric Onco-Hematology Department, University Hospitals of Strasbourg, 1 Avenue Molière, Strasbourg, France.
Alexandra SalmonPediatric Onco-Hematology Department, University Hospitals of Strasbourg, 1 Avenue Molière, Strasbourg, France.
Guillaume BergtholdPediatric Onco-Hematology Department, University Hospitals of Strasbourg, 1 Avenue Molière, Strasbourg, France.
Florence VincentPediatric Onco-Hematology Department, University Hospitals of Strasbourg, 1 Avenue Molière, Strasbourg, France.
Marlène DeschuyterLaboratory of Bioimaging and Pathologies - Team OnKO-3T - Translational, Transversal and Therapeutic Oncology - UMR CNRS 7021, University of Strasbourg, Strasbourg, France.
Marie-Odile BarbazaAuxesia, Decines Charpieu, France.
Natacha Entz-WerléPediatric Onco-Hematology Department, University Hospitals of Strasbourg, 1 Avenue Molière, Strasbourg, France. Natacha.entz-werle@chru-strasbourg.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionFaced to the growing development of collecting systematic molecular analyses in relapsed pediatric cancers to transform their targeted matched therapies, this study aimed to assess the clinical and therapeutic indications of systematic diagnostic genomic explorations performed in pediatric solid cancers to determine which type of screening and if it afford at relapse time an accurate targeted strategy.

methodsA total of 280 patients less than 22 years, referred at the University Hospitals of Strasbourg for a newly diagnosed solid tumor from January 2015 to December 2021, were prospectively genomically investigated since diagnosis. Using 7 different molecular tests going from single-gene methods (IHC, FISH, RT-PCR, Sanger sequencing, droplet digital PCR) to largescale analyses (Next-Generation sequencing, RNAsequencing and FoundationOne®CDx), we explored retrospectively the molecular findings in those pediatric solid tumors (except hematolymphoid cancers) to improve diagnosis, prognosis assessment and relapse therapeutics.

resultsOne hundred and ninety-eight patients (71%) underwent molecular biology (MB) at diagnosis. Thirty-eight different histologies were grouped into cerebral tumors (30%), sarcomas (26%, bone and soft tissues), various blastomas (27%), and other entities (17%). Over a median 40-month follow-up, the overall survival rate of patients was 85% and the relapse rate 28%. Of the 326 analyses carried out, 245 abnormalities (single nucleotide variations: 50%, fusions: 25%, copy number alteration: 20%) concerning 70 oncogenes were highlighted. The overall clinical impact rate was 84%. Broad-spectrum analyses had a higher therapeutic impact (57%) than the targeted analyses (28%). 75% of broad-spectrum tests found an actionable variant conducting 23% of patients to receive rapidly a matched targeted therapy since first relapse.

conclusionOur experience highlighted the clinical utility of molecular profiling of solid tumors as soon as at diagnosis in children to expect improving access to innovative agents at relapse.

Indexed as

GenomicsNeoplasmsPrecision MedicineAdolescentBiomarkers, TumorChildChild, PreschoolFeasibility StudiesFemaleHigh-Throughput Nucleotide SequencingHumansInfantInfant, NewbornMaleNeoplasm Recurrence, LocalPrognosisBiomarkers, TumorNext-generation sequencingPediatric brain tumorsPrecision medicineSolid malignanciesTargeted therapies

Identifiers

PMID39433989
PMCPMC11492794

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.