Evidence map›Paper›PMID 39443993›Full record

ArticleBMC biology2024

SETDB1 targeting SESN2 regulates mitochondrial damage and oxidative stress in renal ischemia-reperfusion injury.

Kang Xia, Yumin Hui, Long Zhang, Qiangmin Qiu, Jiacheng Zhong, Hui Chen, Xiuheng Liu, Lei Wang, Zhiyuan Chen

Abstract read
In one paragraph

Article in BMC biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. The Many Faces of SetDB1.Epigenomes · 2026
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kang Xia *Department of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Yumin Hui *Department of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Long Zhang *Department of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Qiangmin QiuDepartment of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Jiacheng ZhongDepartment of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Hui ChenDepartment of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Xiuheng LiuDepartment of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China. drliuxh@hotmail.com.
Lei WangDepartment of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China. drwanglei@whu.edu.cn.
Zhiyuan ChenDepartment of Urology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China. chenzhiyuan163@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe role of histone methyltransferase SETDB1 in renal ischemia-reperfusion (I/R) injury has not been explored yet. This study aims to investigate the potential mechanism of SETDB1 in regulating renal I/R injury and its impact on mitochondrial damage and oxidative stress.

methodsThe in vivo model of renal I/R in mice and the in vitro model of hypoxia/reoxygenation (H/R) in human renal tubular epithelial cells (HK-2) were constructed to detect the expression of SETDB1. Next, the specific inhibitor (R,R)-59 and knockdown viruses were used to inhibit SETDB1 and verify its effects on mitochondrial damage and oxidative stress. Chromatin immunoprecipitation (ChIP) and coimmunoprecipitation (CoIP) were implemented to explore the in-depth mechanism of SETDB1 regulating renal I/R injury.

resultsThe study found that SETDB1 had a regulatory role in mitochondrial damage and oxidative stress during renal I/R injury. Notably, SESN2 was identified as a target of SETDB1, and its expression was under the influence of SETDB1. Besides, SESN2 mediated the regulation of SETDB1 on renal I/R injury. Through deeper mechanistic studies, we uncovered that SETDB1 collaborates with heterochromatin HP1β, facilitating the labeling of H3K9me3 on the SESN2 promoter and impeding SESN2 expression.

conclusionsThe SETDB1/HP1β-SESN2 axis emerges as a potential therapeutic strategy for mitigating renal I/R injury.

Indexed as

Histone-Lysine N-MethyltransferaseKidneyReperfusion InjuryAnimalsChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneGene ExpressionHumansMiceMitochondriaOxidative StressPromoter Regions, GeneticSestrinsCBX1 protein, humanCbx1 protein, mouseChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneHistone-Lysine N-MethyltransferaseSESN2 protein, humanSesn2 protein, mouseSestrinsSETDB1 protein, humanSETDB1 protein, mouseMitochondrial damageOxidative stressRenal ischemia–reperfusion injurySESN2SETDB1

Identifiers

PMID39443993
PMCPMC11515507

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.