Evidence map›Paper›PMID 39447176›Full record

ArticleAmerican journal of respiratory cell and molecular biology2025

Cell Population-resolved Multiomics Atlas of the Developing Lung.

Mereena G Ushakumary, Song Feng, Gautam Bandyopadhyay, Heather Olson, Karl K Weitz, Heidi L Huyck, Cory Poole, Jeffrey M Purkerson, Soumyaroop Bhattacharya, M Cecilia Ljungberg and 7 more

Abstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Sexually distinct multi-omic responses to progressive endurance exercise training in the rat lung.American journal of respiratory cell and molecular biology · 2026
    Article
  2. Rediscovering Lung Lipofibroblast: A Lipid Wizard on the Alveolar Fibroblast Spectrum.American journal of respiratory cell and molecular biology · 2026
    Article
  3. Article
  4. A Developmental Step Along the 'Omics Journey.American journal of respiratory cell and molecular biology · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Mereena G UshakumaryBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington.
Song FengBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington.
Gautam BandyopadhyayDepartment of Pediatrics, School of Medicine and Dentistry, University of Rochester, Rochester, New York.
Heather OlsonBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington.
Karl K WeitzBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington.
Heidi L HuyckDepartment of Pediatrics, School of Medicine and Dentistry, University of Rochester, Rochester, New York.
Cory PooleDepartment of Pediatrics, School of Medicine and Dentistry, University of Rochester, Rochester, New York.
Jeffrey M PurkersonDepartment of Pediatrics, School of Medicine and Dentistry, University of Rochester, Rochester, New York.
Soumyaroop BhattacharyaDepartment of Pediatrics, School of Medicine and Dentistry, University of Rochester, Rochester, New York.
M Cecilia LjungbergDepartment of Pediatrics, College of Medicine, Baylor University, Houston, Texas.
Thomas J MarianiDepartment of Pediatrics, School of Medicine and Dentistry, University of Rochester, Rochester, New York.
Gail H DeutschDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, Washington.
Ravi S MisraDepartment of Pediatrics, School of Medicine and Dentistry, University of Rochester, Rochester, New York.
James P CarsonTexas Advanced Computing Center, University of Texas at Austin, Austin, Texas; and.
Joshua N AdkinsBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington.
Gloria S PryhuberDepartment of Pediatrics, School of Medicine and Dentistry, University of Rochester, Rochester, New York.ORCID 0000-0002-9185-3994
Geremy ClairBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington.ORCID 0000-0003-0478-8520

Funding

BioRepository for INvestigation of Diseases of the Lung (BRINDL) - Phase IIIU01HL148861 · NHLBI · UNIVERSITY OF ROCHESTER · PI GLORIA S PRYHUBER · 2019 to 2026
$9.7M
The Human Lung BioMolecular Multi-Scale Atlas Program (HuBMAP-Lung)U54HL165443 · NHLBI · UNIVERSITY OF ROCHESTER · PI PRYHUBER, GLORIA S · 2022 to 2025
$8.0M
Biorepository for Investigation of Neonatal Diseases of Lung-Normal (BRINDL-NL)U01HL122700 · NHLBI · UNIVERSITY OF ROCHESTER · PI PRYHUBER, GLORIA S · 2014 to 2018
$6.1M
Research Center for Spatiotemporal Lung Imaging and OmicsU01HL148860 · NHLBI · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI ADKINS, JOSHUA N., CARSON, JAMES PAUL · 2019 to 2023
$4.7M
NHLBI NIH HHS U01 HL122700NHLBI NIH HHS U01HL122700NHLBI NIH HHS U01 HL148860NHLBI NIH HHS U01HL148860NHLBI NIH HHS U01 HL148861NHLBI NIH HHS U01HL148861NHLBI NIH HHS U54 HL165443
6 · The paper itself

Abstract

The lung is a vital organ that undergoes extensive morphological and functional changes during postnatal development. To disambiguate how different cell populations contribute to organ development, we performed proteomic and transcriptomic analyses of four sorted cell populations from the lung of human subjects 0-8 years of age with a focus on early life. The cell populations analyzed included epithelial, endothelial, mesenchymal, and immune cells. Our results revealed distinct molecular signatures for each of the sorted cell populations that enable the description of molecular shifts occurring in these populations during postnatal development. We confirmed that the proteome of the different cell populations was distinct regardless of age and identified functions specific to each population. We identified a series of cell population protein markers, including those located at the cell surface, that show differential expression and distribution on RNA

Indexed as

LungProteomeProteomicsChildChild, PreschoolEndothelial CellsFemaleGene Expression ProfilingHumansInfantInfant, NewbornMaleMultiomicsTranscriptomeProteomecell typesproteomicspulmonary developmenttranscriptomics

Identifiers

PMID39447176
PMCPMC12051933

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.