Evidence map›Paper›PMID 39448899›Full record

ArticleBMC genomics2024

snRNA-seq of adipose tissues reveals the potential cellular and molecular mechanisms of cold and disease resistance in Mongolian cattle.

Zhiduan Chi, Qiong Jia, Haoyu Yang, Hongrui Ren, Congli Jin, Jinxin He, Nile Wuri, Ze Sui, Junzhen Zhang, Bayier Mengke and 7 more

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Zhiduan ChiCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China.
Qiong JiaCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China.
Haoyu YangCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China.
Hongrui RenCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China.
Congli JinCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China.
Jinxin HeCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China.
Nile WuriCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China.
Ze SuiCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China.
Junzhen ZhangCollege of Animal Science, Shanxi Agricultural University, Taigu, 030801, China.
Bayier MengkeAnimal Husbandry and Veterinary Technology Extension Center of Alxa League, Alxa Left Banner, 750300, China.
Lixian ZhuAnimal Husbandry and Veterinary Technology Extension Center of Alxa League, Alxa Left Banner, 750300, China.
Ge QiqiAnimal Husbandry and Veterinary Technology Extension Center of Alxa League, Alxa Left Banner, 750300, China.
Sarengaowa AierqingAnimal Husbandry and Veterinary Technology Extension Center of Alxa League, Alxa Left Banner, 750300, China.
Ji WuliAnimal Husbandry and Veterinary Technology Extension Center of Alxa League, Alxa Left Banner, 750300, China.
Dong AiBureau of Agriculture and Animal Husbandry of Alxa League, Bayanhot, 750306, China.
Ruiwen FanCollege of Veterinary Medicine, Shanxi Agricultural University, Taigu, 030801, China. ruiwenfan@163.com.
Muren HerridGrassland & Cattle Investment Co., Ltd, Hohhot, 011500, China. mherrid@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMongolian cattle are local breeds in northern China with excellent adaptability to harsh environmental conditions. Adipose tissues play essential roles in tolerance to cold and disease, but the associated cellular and molecular mechanisms are unclear.

methodsSingle-nucleus RNA sequencing (snRNA-seq) was performed on the adipose tissues from the subcutaneous (SAT), greater omentum (OAT) and perirenal (PAT) of 3 healthy cattle. The adipogenic trajectory was analyzed, and the functional roles of gene of interest were verified in vitro.

resultsThere were different cell subpopulations in adipose tissues. The lipid-deposition adipocytes identified by the PTGER3 marker exhibited outstanding characteristics in SAT. In PAT and OAT, aldosterone was expressed to provide clues for the differential brown adipocytes. Among the DEGs by comparing OAT with SAT and PAT with OAT, C3 was significantly expressed in most of the cell populations in SAT. G0S2, LIPE, LPIN1, PTGER3 and RGCC took part in the adipogenic trajectory from preadipocyte commitment to mature adipocytes. S100A4 expression affected Ca

conclusionThe cell heterogeneity and genes expressed in adipose tissues of Mongolian cattle not only determine the endocrine and energy storage, but contribute to adapt to cold and disease resistance.

Indexed as

Adipose TissueCold TemperatureAdipocytesAdipogenesisAnimalsCattleDisease ResistanceRNA-SeqAdipose tissueEndocrineImmuneLipidMongolian cattleSingle-nucleus RNA sequencing (snRNA-seq)Thermogenesis

Identifiers

PMID39448899
PMCPMC11520132

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.