Evidence map›Paper›PMID 39450855›Full record

ArticleeLife2024

Emergence of planar cell polarity from the interplay of local interactions and global gradients.

Divyoj Singh, Sriram Ramaswamy, Mohit Kumar Jolly, Mohd Suhail Rizvi

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Divyoj SinghDepartment of Bioengineering, Indian Institute of Science, Bangalore, India.ORCID https://orcid.org/0000-0003-1552-2701
Sriram RamaswamyCentre for Condensed Matter Theory, Department of Physics, Indian Institute of Science, Bengalore, India.ORCID https://orcid.org/0000-0001-7726-8556
Mohit Kumar JollyDepartment of Bioengineering, Indian Institute of Science, Bangalore, India.ORCID https://orcid.org/0000-0002-6631-2109
Mohd Suhail RizviDepartment of Biomedical Engineering, Indian Institute of Technology, Hyderabad, India.ORCID https://orcid.org/0000-0002-4130-4671

Funding

Science and Engineering Research Board SB/S2/RJN-049/2018Science and Engineering Research Board SRG/2021/001020
6 · The paper itself

Abstract

Planar cell polarity (PCP) - tissue-scale alignment of the direction of asymmetric localization of proteins at the cell-cell interface - is essential for embryonic development and physiological functions. Abnormalities in PCP can result in developmental imperfections, including neural tube closure defects and misaligned hair follicles. Decoding the mechanisms responsible for PCP establishment and maintenance remains a fundamental open question. While the roles of various molecules - broadly classified into 'global' and 'local' modules - have been well-studied, their necessity and sufficiency in explaining PCP and connecting their perturbations to experimentally observed patterns have not been examined. Here, we develop a minimal model that captures the proposed features of PCP establishment - a global tissue-level gradient and local asymmetric distribution of protein complexes. The proposed model suggests that while polarity can emerge without a gradient, the gradient not only acts as a global cue but also increases the robustness of PCP against stochastic perturbations. We also recapitulated and quantified the experimentally observed features of swirling patterns and domineering non-autonomy, using only three free model parameters - rate of protein binding to membrane, the concentration of PCP proteins, and the gradient steepness. We explain how self-stabilizing asymmetric protein localizations in the presence of tissue-level gradient can lead to robust PCP patterns and reveal minimal design principles for a polarized system.

Indexed as

Cell PolarityAnimalsModels, Biologicalasymmetric localizationcomputational biologydomineering non-autonomyinter-cellular hetero-dimernonepattern formationphysics of living systemsplanar cell polaritysystems biologytissue-level gradients

Identifiers

PMID39450855
PMCPMC11602187

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.