Evidence map›Paper›PMID 39454432›Full record

ArticleNeoplasia (New York, N.Y.)2024

Systematic analysis of human colorectal cancer scRNA-seq revealed limited pro-tumoral IL-17 production potential in gamma delta T cells.

Ran Ran, Martin Trapecar, Douglas K Brubaker

Abstract read
In one paragraph

Article in Neoplasia (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. γδ T cells in colorectal and liver cancer.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  2. Article
  3. Review
  4. Review
  5. IntegratingFrontiers in immunology · 2026
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Cancer immunotherapy by γδ T cells.Science (New York, N.Y.) · 2024
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Ran RanCenter for Global Health and Diseases, Department of Pathology, Case Western Reserve University, Cleveland, OH, USA.
Martin TrapecarDepartment of Medicine, Johns Hopkins University School of Medicine, Institute for Fundamental Biomedical Research, Johns Hopkins All Children's Hospital, St. Petersburg, FL, USA; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Douglas K BrubakerCenter for Global Health and Diseases, Department of Pathology, Case Western Reserve University, Cleveland, OH, USA; The Blood, Heart, Lung, and Immunology Research Center, Case Western Reserve University, University Hospitals of Cleveland, Cleveland, OH, USA. Electronic address: dkb50@case.edu.

Funding

Uncovering the hidden universe of metabolite-specific T lymphocytes,using human multiorgan microphysiological systems.R35GM146900 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI Martin Trapecar · 2022 to 2026
$2.2M
NIGMS NIH HHS R35 GM146900
6 · The paper itself

Abstract

Gamma delta T cells play a crucial role in anti-tumor immunity due to their cytotoxic properties. However, the role and extent of γδ T cells in production of pro-tumorigenic interleukin-17 (IL-17) within the tumor microenvironment of colorectal cancer (CRC) remains controversial. In this study, we re-analyzed nine published human CRC whole-tissue single-cell RNA sequencing datasets, identifying 18,483 γδ T cells out of 951,785 total cells, in the neoplastic or adjacent normal tissue of 165 human CRC patients. Our results confirm that tumor-infiltrating γδ T cells exhibit high cytotoxicity-related transcription in both tumor and adjacent normal tissues, but critically, none of the γδ T cell clusters showed IL-17 production potential. We also identified various γδ T cell subsets, including poised effector-like T cells, tissue-resident memory T cells, progenitor exhausted-like T cells, and exhausted T cells, and noted an increased expression of cytotoxic molecules in tumor-infiltrating γδ T cells compared to their normal area counterparts. We proposed anti-tumor γδ T effector cells may arise from tissue-resident progenitor cells based on the trajectory analysis. Our work demonstrates that γδ T cells in CRC primarily function as cytotoxic effector cells rather than IL-17 producers, mitigating the concerns about their potential pro-tumorigenic roles in CRC, highlighting the importance of accurately characterizing these cells for cancer immunotherapy research and the unneglectable cross-species discrepancy between the mouse and human immune system in the study of cancer immunology.

Indexed as

Colorectal NeoplasmsInterleukin-17Lymphocytes, Tumor-InfiltratingT-Lymphocyte SubsetsHumansIntraepithelial LymphocytesReceptors, Antigen, T-Cell, gamma-deltaRNA-SeqSingle-Cell AnalysisSingle-Cell Gene Expression AnalysisTumor MicroenvironmentInterleukin-17Receptors, Antigen, T-Cell, gamma-deltaColorectal cancerGamma delta T cellsSingle-cell transcriptomics

Identifiers

PMID39454432
PMCPMC11539345

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.