Evidence map›Paper›PMID 39455674›Full record

ArticleScientific reports2024

A single nucleotide substitution introducing premature stop codon within CsTFL1 explains the determinate-2 phenotype in cucumber (Cucumis sativus L.).

Bartosz Biernacik, Renata Słomnicka, Karolina Kaźmińska, Szymon Mużacz, Grzegorz Bartoszewski

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Bartosz BiernacikDepartment of Plant Genetics Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland.
Renata SłomnickaDepartment of Plant Genetics Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland.
Karolina KaźmińskaDepartment of Plant Genetics Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland.
Szymon MużaczDepartment of Plant Genetics Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland.
Grzegorz BartoszewskiDepartment of Plant Genetics Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Warsaw, Poland. grzegorz_bartoszewski@sggw.edu.pl.

Funding

Ministerstwo Rolnictwa i Rozwoju Wsi, Polska Task 33
6 · The paper itself

Abstract

The determinate growth habit of plants reduces the number of internodes and shortens the main stem by terminating the shoot apical meristem through a transition to inflorescence. Understanding the genetic basis of this habit can help optimize crop yield and cultivation technology for vegetable breeding. This study aimed to identify the determinate-2 (de-2) gene responsible for the determinate growth habit in the W-sk cucumber line. Termination of the main stem in the W-sk line occurred between 14 and 23 internodes, depending on cultivation conditions. Resequencing of the W-sk genome identified a novel SNP in the cucumber TERMINAL FLOWER1 (CsTFL1) gene, explaining the de-2 phenotype. This was verified with a CAPS-T marker cosegregation with determinate growth in the F

Indexed as

Codon, NonsenseCucumis sativusPhenotypePolymorphism, Single NucleotidePlant BreedingPlant ProteinsCodon, NonsensePlant ProteinsCucurbitsDeterminate growthPlant architectureSAM transitionTFL1

Identifiers

PMID39455674
PMCPMC11511849

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.