Evidence map›Paper›PMID 39456831›Full record

ArticleInternational journal of molecular sciences2024

The Avoidance of Purine Stretches by Cancer Mutations.

Aleksandr V Vikhorev, Ivan V Savelev, Oksana O Polesskaya, Michael M Rempel, Richard A Miller, Alexandre A Vetcher, Max Myakishev-Rempel

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Aleksandr V VikhorevDNA Resonance Research Foundation, San Diego, CA 92111, USA.
Ivan V SavelevDNA Resonance Research Foundation, San Diego, CA 92111, USA.
Oksana O PolesskayaDNA Resonance Research Foundation, San Diego, CA 92111, USA.
Michael M RempelDNA Resonance Research Foundation, San Diego, CA 92111, USA.
Richard A MillerOAK, Inc., Grants Pass, OR 97526, USA.
Alexandre A VetcherInstitute of Pharmacy and Biotechnology (IPhB) of Peoples' Friendship University of Russia n.a. P. Lumumba (RUDN), 6 Miklukho-Maklaya St, 117198 Moscow, Russia.ORCID 0000-0002-4828-8571
Max Myakishev-RempelDNA Resonance Research Foundation, San Diego, CA 92111, USA.ORCID 0000-0002-7893-2049

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purine stretches, sequences of adenine (A) and guanine (G) in DNA, play critical roles in binding regulatory protein factors and influence gene expression by affecting DNA folding. This study investigates the relationship between purine stretches and cancer development, considering the aromaticity of purines, quantified by methods like Hückel's rule and NICS calculations, and the importance of the flanking sequence context. A pronounced avoidance of long purine stretches by typical cancer mutations was observed in public data on the intergenic regions of cancer patients, suggesting a role of intergenic sequences in chromatin reorganization and gene regulation. A statistically significant shortening of purine stretches in cancerous tumors (

Indexed as

MutationNeoplasmsPurinesChromatinDNAHumansChromatinDNAPurinesaminearomaticitycancer developmentdelocalizationdouble helixenolflanking sequencemutation susceptibilitypurine stretchesquantum-chemical modelstautomers

Identifiers

PMID39456831
PMCPMC11507618

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.