Evidence map›Paper›PMID 39457935›Full record

ArticleAnimals : an open access journal from MDPI2024

Analysis of Differential Alternative Splicing in Largemouth Bass After High Temperature Exposure.

Xianxian Zhao, Yizhou Wang, Zhenlu Wang, Tianma Luo, Jun Huang, Jian Shao

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xianxian ZhaoCollege of Animal Science, Guizhou University, Guiyang 550025, China.ORCID 0009-0006-9282-7268
Yizhou WangCollege of Animal Science, Guizhou University, Guiyang 550025, China.ORCID 0009-0009-8569-9036
Zhenlu WangCollege of Animal Science, Guizhou University, Guiyang 550025, China.
Tianma LuoCollege of Animal Science, Guizhou University, Guiyang 550025, China.
Jun HuangHubei Fisheries Science Research Institute, Wuhan 430077, China.
Jian ShaoCollege of Animal Science, Guizhou University, Guiyang 550025, China.

Funding

Guizhou Provincial Basic Research Program (Natural Science) QianKeHeJiChu-ZK[2024]YiBan034Program Foundation for Talents of Guizhou University [2021]53Science and Technology Project of Guizhou Province, China [2020]4Y027
6 · The paper itself

Abstract

Temperature is one of the critical factors affecting the physiological functions of fish. With ongoing global warming, changes in water temperature have a profound impact on fish species. Alternative splicing, being a significant mechanism for gene expression regulation, facilitates fish to adapt and thrive in dynamic and varied aquatic environments. Our study used transcriptome sequencing to analyze alternative splicing in largemouth bass gills at 34 °C for 24 h. The findings indicated an increase in both alternative splicing events and alternative splicing genes after high temperature treatment. Specifically, the comparative analysis revealed a total of 674 differential alternative splicing events and 517 differential alternative splicing genes. Enrichment analysis of differential alternative splicing genes revealed significant associations with various gene ontology (GO) terms and KEGG pathways, particularly in immune-related pathways like necroptosis, apoptosis, and the C-type lectin receptor signaling pathway. These results emphasize that some RNA splicing-related genes are involved in the response of largemouth bass to high temperatures.

Indexed as

differential alternative splicingenvironmental stresslargemouth basstranscriptome sequencing

Identifiers

PMID39457935
PMCPMC11505094

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.