Evidence map›Paper›PMID 39475327›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2024

The in vivo effects of knockdown of long non-coding RNA XIST on fibroid growth and gene expression.

Tsai-Der Chuang, Nhu Ton, Shawn Rysling, Omid Khorram

Abstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Transcriptomic and functional analysis of fibroid extracellular vesicles.Clinical science (London, England : 1979) · 2026
    Article
  3. Review
  4. Review
  5. Review
  6. Article
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Tsai-Der ChuangThe Lundquist Institute for Biomedical Innovation, Torrance, California, USA.
Nhu TonThe Lundquist Institute for Biomedical Innovation, Torrance, California, USA.
Shawn RyslingThe Lundquist Institute for Biomedical Innovation, Torrance, California, USA.
Omid KhorramThe Lundquist Institute for Biomedical Innovation, Torrance, California, USA.ORCID 0000-0003-4996-5762

Funding

Tryptophan metabolism and its role in fibroid pathogenesisR01HD109286 · NICHD · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI OMID A. KHORRAM · 2022 to 2026
$1.9M
Mechanism of Long Non-coding RNAs Action in leiomyomaR01HD100529 · NICHD · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI KHORRAM, OMID A. · 2020 to 2023
$1.7M
Function of Long Non-Coding RNA MD1 in Leiomyoma PathogenesisR03HD101852 · NICHD · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI KHORRAM, OMID A. · 2021 to 2022
$154k
HHS | National Institutes of Health (NIH) HD100529HHS | National Institutes of Health (NIH) HD101852HHS | National Institutes of Health (NIH) HD109286NICHD NIH HHS R01 HD100529NICHD NIH HHS R01 HD109286NICHD NIH HHS R03 HD101852
6 · The paper itself

Abstract

The role of long non-coding RNAs in fibroid pathogenesis remains largely unexplored. In a previous study, we found elevated XIST (X-inactive specific transcript) levels in fibroids, which sponged miR-29c and miR-200c, leading to the overexpression of their target genes. This study aimed to assess the therapeutic potential of XIST downregulation in fibroid treatment. Ovariectomized SCID (severe combined immunodeficiency) mice were implanted with fibroid tumors transduced with XIST siRNA or a control via lentivirus. After 1 month, animals were sacrificed and the xenografts were removed for further analysis. XIST knockdown reduced tumor weight by 15% and increased miR-29c and miR-200c expression by 3.9-fold and 2.2-fold, respectively. The mRNA expression of miR-29c targets (COL3A1, TGF-β3, CDK2, SPARC) and miR-200c targets (CDK2, FN1, TDO2), as well as PRL, E2F1, and EZH2, was significantly decreased. Protein abundance of collagen, COL3A1, FN1, CDK2, SPARC, and EZH2 was also reduced. IHC analysis of xenograft sections using the markers of Ki67 for cell proliferation and cleaved caspase 3 for apoptosis showed decreased cell proliferation and no changes in apoptosis in the XIST knockdown xenografts. This analysis also revealed decreased collagen and E2F1 staining nuclei in the XIST knockdown xenografts. These results indicate that downregulation of XIST in fibroids has beneficial therapeutic effects, by reducing tumor growth and the expression of genes involved in cell proliferation, inflammation, and extracellular matrix regulation.

Indexed as

Gene Expression Regulation, NeoplasticLeiomyomaMicroRNAsRNA, Long NoncodingAnimalsCell Line, TumorCell ProliferationFemaleGene Knockdown TechniquesHumansMiceMice, SCIDUterine NeoplasmsMicroRNAsRNA, Long NoncodingXIST non-coding RNAcell proliferationECMfibroidinflammationmiR‐200cmiR‐29cXIST

Identifiers

PMID39475327
PMCPMC12097159

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.