Evidence map›Paper›PMID 39481385›Full record

ArticleMolecular cell2024

Excessive MYC-topoisome activity triggers acute DNA damage, MYC degradation, and replacement by a p53-topoisome.

Subhendu K Das, Sharmistha Karmakar, Harish Venkatachalapathy, Rajiv Kumar Jha, Eric Batchelor, David Levens

Abstract read
In one paragraph

Article in Molecular cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Dynamic Supercoiling Sponsors Transcription Amplification by MYC.bioRxiv : the preprint server for biology · 2026
    Article
  9. Review
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Subhendu K DasLaboratory of Pathology, National Cancer Institute, Bethesda, MD 20892, USA.
Sharmistha KarmakarEnergy Storage and Technology Department, Energy and Environment Science and Technology Division, Idaho National Laboratory, Idaho Falls, ID 83415, USA.
Harish VenkatachalapathyDepartment of Integrative Biology and Physiology, University of Minnesota, Minneapolis, MN, USA.
Rajiv Kumar JhaLaboratory of Pathology, National Cancer Institute, Bethesda, MD 20892, USA.
Eric BatchelorDepartment of Integrative Biology and Physiology, University of Minnesota, Minneapolis, MN, USA.
David LevensLaboratory of Pathology, National Cancer Institute, Bethesda, MD 20892, USA. Electronic address: levensd@mail.nih.gov.

Funding

The genome-wide function of supercoiling and alternative DNA conformationsZIABC011011 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LEVENS, DAVID L. · 2009 to 2025
$16.1M
c-Myc FunctionZIABC011465 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LEVENS, DAVID L. · 2012 to 2025
$8.6M
The roles of p53 and MYC dynamics in regulating heterogeneous cell fate responses to genotoxic stressR01GM149666 · NIGMS · UNIVERSITY OF MINNESOTA · PI Eric Batchelor · 2023 to 2026
$1.3M
Intramural NIH HHS ZIA BC011011Intramural NIH HHS ZIA BC011465NIGMS NIH HHS R01 GM149666
6 · The paper itself

Abstract

Hyperproliferation driven by the protooncogene MYC may lead to tumor suppressor p53 activating DNA damage that has been presumed to derive from hypertranscription and over-replication. Here, we report that excessive MYC-topoisome (MYC/topoisomerase 1/topoisomerase 2) activity acutely damages DNA-activating pATM and p53. In turn, MYC is shut off and degraded, releasing TOP1 and TOP2A from MYC topoisomes in vitro and in vivo. To manage the topological and torsional stress generated at its target genes, p53 assembles a separate topoisome. Because topoisomerase activity is intrinsically DNA damaging, p53 topoisomes provoke an initial burst of DNA damage. Because p53, unlike MYC, upregulates the DNA-damage response (DDR) and activates tyrosyl-DNA-phosphodiesterase (TDP) 1 and TDP2, it suppresses further topoisome-mediated damage. The physical coupling and activation of TOP1 and TOP2 by p53 creates a tool that supports p53-target expression while braking MYC-driven proliferation in mammalian cells.

Indexed as

DNA DamageDNA Topoisomerases, Type IDNA Topoisomerases, Type IIPoly-ADP-Ribose Binding ProteinsProto-Oncogene Proteins c-mycTumor Suppressor Protein p53AnimalsCell ProliferationDNA-Binding ProteinsHumansMiceProteolysisDNA-Binding ProteinsDNA Topoisomerases, Type IDNA Topoisomerases, Type IIMYC protein, humanMyc protein, mousePoly-ADP-Ribose Binding ProteinsProto-Oncogene Proteins c-mycTOP1 protein, humanTOP2A protein, humanTop2a protein, mouseTP53 protein, humanTumor Suppressor Protein p53DNA damageDNA repairMYC-topoisomep53supercoilingtopoisomerase

Identifiers

PMID39481385
PMCPMC11560571

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.