Evidence map›Paper›PMID 39484232›Full record

ArticlemedRxiv : the preprint server for health sciences2024

Mapping the epigenomic landscape of post-traumatic stress disorder in human cortical neurons.

Diana L Núñez-Ríos, Sheila T Nagamatsu, Jose Jaime Martínez-Magaña, Yasmin Hurd, Gregory Rompala, John H Krystal, Traumatic Stress Brain Research Group, Janitza L Montalvo-Ortiz

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Diana L Núñez-RíosDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.
Sheila T NagamatsuDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.
Jose Jaime Martínez-MagañaDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.
Yasmin HurdIcahn School of Medicine at Mount Sinai, New York City, NY, USA.
Gregory RompalaIcahn School of Medicine at Mount Sinai, New York City, NY, USA.
John H KrystalDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.
Traumatic Stress Brain Research Group
Janitza L Montalvo-OrtizDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.

Funding

Deciphering the single-nucleus genomic regulatory structure of opioid use disorder in the human brainDP1DA058737 · NIDA · YALE UNIVERSITY · PI Janitza Liz Montalvo-Ortiz · 2023 to 2026
$2.0M
Integrative Epigenomic Mapping of Co-Morbid OUD and PTSD SupplementR21DA050160 · NIDA · YALE UNIVERSITY · PI MONTALVO-ORTIZ, JANITZA LIZ · 2020 to 2021
$433k
Identifying Biomarkers of Post-traumatic Stress Disorder in U.S. Veterans using an Integrative Multi-Omics ApproachIK2CX002095 · VA · VA CONNECTICUT HEALTHCARE SYSTEM · PI Janitza Liz Montalvo-Ortiz · 2020 to 2026
–
CSRD VA IK2 CX002095NIDA NIH HHS DP1 DA058737NIDA NIH HHS R21 DA050160
6 · The paper itself

Abstract

The study conducted a comprehensive genome-wide analysis of differential 5mC and 5hmC modifications at both CpG and non-CpG sites in postmortem orbitofrontal neurons from 25 PTSD cases and 13 healthy controls. It was observed that PTSD patients exhibit a greater number of differential 5hmC sites compared to 5mC sites. Specifically, individuals with PTSD tend to show hyper-5mC/5hmC at CpG sites, particularly within CpG islands and promoter regions, and hypo-5mC/5hmC at non-CpG sites, especially within intragenic regions. Functional enrichment analysis indicated distinct yet interconnected roles for 5mC and 5hmC in PTSD. The 5mC marks primarily regulate cell-cell adhesion processes, whereas 5hmC marks are involved in embryonic morphogenesis and cell fate commitment. By integrating published PTSD findings from central and peripheral tissues through multi-omics approaches, several biological mechanisms were prioritized, including developmental processes, HPA axis regulation, and immune responses. Based on the consistent enrichment in developmental processes, we hypothesize that if epigenetic changes occur during early developmental stages, they may increase the risk of developing PTSD following trauma exposure. Conversely, if these epigenetic changes occur in adulthood, they may influence neuronal apoptosis and survival mechanisms.

Identifiers

PMID39484232
PMCPMC11527063

What Socratic holds

Textmetadata
LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.