Evidence map›Paper›PMID 39484548›Full record

ArticlebioRxiv : the preprint server for biology2024

Super Resolved Single-Cell Spatial Metabolomics from Multimodal Mass Spectrometry Imaging guided by Imaging Mass Cytometry.

Efe Ozturk, Abhijeet Venkataraman, Felix G Rivera Moctezuma, Ahmet F Coskun

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Efe OzturkWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.ORCID 0009-0002-9131-2677
Abhijeet VenkataramanWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Felix G Rivera MoctezumaWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Ahmet F CoskunWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.ORCID 0000-0002-5797-1524

Funding

Dissecting subcellular and cellular organization by spatial molecular neighborhood networksR35GM151028 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI Ahmet F. Coskun · 2023 to 2026
$1.5M
Decoding Spatially Resolved Single Cell Metabolic Trajectory of Tonsil Tissues and OrganoidsR21AI173900 · NIAID · GEORGIA INSTITUTE OF TECHNOLOGY · PI COSKUN, AHMET F., SINGH, ANKUR · 2023 to 2024
$433k
Tissue systems biology of immune dysregulation in aging by single cell spatial metabolomicsR21AG081715 · NIA · GEORGIA INSTITUTE OF TECHNOLOGY · PI COSKUN, AHMET F. · 2023 to 2024
$391k
NIAID NIH HHS R21 AI173900NIA NIH HHS R21 AG081715NIGMS NIH HHS R35 GM151028
6 · The paper itself

Abstract

Mass spectrometry imaging (MSI) is a powerful technique for spatially resolved analysis of metabolites and other biomolecules within biological titissues. However, the inherent low spatial resolution of MSI often limits its ability to provide detailed cellular-level information. To address this limitation, we propose a guided super-resolution (GSR) approach that leverages high-resolution Imaging Mass Cytometry (IMC) images to enhance the spatial resolution of low-resolution MSI data. By using these detailed IMC images as guides, we improve the resolution of MSI images, creang high-resolution metabolite maps. This enhancement facilitates more precise analysis of cellular structures and tissue architectures, providing deeper insights into super-resolved spatial metabolomics at the single-cell level.

Identifiers

PMID39484548
PMCPMC11526965

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.