Evidence map›Paper›PMID 39487316›Full record

ArticleNature materials2025

Cell tumbling enhances stem cell differentiation in hydrogels via nuclear mechanotransduction.

Manish Ayushman, Georgios Mikos, Xinming Tong, Sauradeep Sinha, Eunice Lopez-Fuentes, Sarah Jones, Pamela C Cai, Hung-Pang Lee, Ashby J Morrison, Andrew Spakowitz and 3 more

Abstract read
In one paragraph

Article in Nature materials, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Review
  2. Smart Bioinks for 4D Bioprinting: Requirements, Design, and Applications.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Redox- and Photo-Responsive FeACS applied materials & interfaces · 2026
    Article
  8. Article
  9. Article
  10. Mechanical cues regulateMaterials today. Bio · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Manish AyushmanDepartment of Bioengineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-9290-9339
Georgios Mikos *Department of Chemical Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0003-1144-5585
Xinming Tong *Department of Orthopaedic Surgery, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0001-7585-3866
Sauradeep SinhaDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Eunice Lopez-FuentesDivision of Oncology, Department of Pediatrics, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0001-6794-5883
Sarah JonesDepartment of Chemistry, Stanford University, Stanford, CA, USA.
Pamela C CaiDepartment of Chemical Engineering, Stanford University, Stanford, CA, USA.
Hung-Pang LeeDepartment of Orthopaedic Surgery, Stanford University School of Medicine, Stanford, CA, USA.
Ashby J MorrisonDepartment of Biology, Stanford University, Stanford, CA, USA.ORCID 0000-0003-1228-5093
Andrew SpakowitzDepartment of Chemical Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-0585-1942
Sarah C HeilshornDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-9801-6304
Alejandro Sweet-CorderoDivision of Oncology, Department of Pediatrics, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0002-9787-9351
Fan YangDepartment of Bioengineering, Stanford University, Stanford, CA, USA. fanyang@stanford.edu.ORCID 0000-0002-0418-0403

Funding

The Role of Chromatin in Metabolic Homeostasis SupplementalR35GM119580 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 2016 to 2025
$4.7M
Microribbon scaffold-mediated Immunomodulation for Cranial Bone RepairR01DE024772 · NIDCR · STANFORD UNIVERSITY · PI YANG, FAN · 2015 to 2025
$4.6M
Sliding hydrogels for accelerating cartilage regenerationR01AR074502 · NIAMS · STANFORD UNIVERSITY · PI YANG, FAN · 2019 to 2023
$2.2M
Engineering Brain Cancer in a Dish: Hydrogel-based 3D in vitro Models for Pediatric Brain TumorF31CA246972 · NCI · STANFORD UNIVERSITY · PI SINHA, SAURADEEP · 2020 to 2023
$126k
NCI NIH HHS F31 CA246972NIAMS NIH HHS R01 AR074502NIDCR NIH HHS R01 DE024772NIGMS NIH HHS R35 GM119580
6 · The paper itself

Abstract

Cells can deform their local niche in three dimensions via whole-cell movements such as spreading, migration or volume expansion. These behaviours, occurring over hours to days, influence long-term cell fates including differentiation. Here we report a whole-cell movement that occurs in sliding hydrogels at the minutes timescale, termed cell tumbling, characterized by three-dimensional cell dynamics and hydrogel deformation elicited by heightened seconds-to-minutes-scale cytoskeletal and nuclear activity. Studies inhibiting or promoting the cell tumbling of mesenchymal stem cells show that this behaviour enhances differentiation into chondrocytes. Further, it is associated with a decrease in global chromatin accessibility, which is required for enhanced differentiation. Cell tumbling also occurs during differentiation into other lineages and its differentiation-enhancing effects are validated in various hydrogel platforms. Our results establish that cell tumbling is an additional regulator of stem cell differentiation, mediated by rapid niche deformation and nuclear mechanotransduction.

Indexed as

ChondrogenesisMesenchymal Stem CellsBiomechanical PhenomenaCell Culture TechniquesCell DifferentiationChromatinEpigenetic RepressionHumansHydrogelsMechanotransduction, CellularMicroscopy, ConfocalSignal TransductionChromatinHydrogels

Identifiers

PMID39487316
PMCPMC12790460

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.