Evidence map›Paper›PMID 39495910›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

tRNA modification enzyme-dependent redox homeostasis regulates synapse formation and memory.

Kimberly R Madhwani, Shanzeh Sayied, Carlson H Ogata, Caley A Hogan, Jenna M Lentini, Moushami Mallik, Jennifer L Dumouchel, Erik Storkebaum, Dragony Fu, Kate M O'Connor-Giles

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. RNA dynamics in oxidative stress: From obscurity to mechanistic understanding in health and disease.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. tRNA modification enzyme-dependent redox homeostasis regulates synapse formation and memory.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Kimberly R MadhwaniNeuroscience Graduate Program, Brown University, Providence, RI 02912.ORCID 0000-0002-4400-4463
Shanzeh SayiedDepartment of Neuroscience, Brown University, Providence, RI 02912.ORCID 0000-0003-0117-2405
Carlson H OgataDepartment of Biology, Brown University, Providence, RI 02912.ORCID 0009-0004-6140-2895
Caley A HoganLaboratory of Genetics, University of Wisconsin-Madison, Madison, WI 53706.
Jenna M LentiniDepartment of Biology, Center for RNA Biology, University of Rochester, Rochester, NY 14627.
Moushami MallikMolecular Neurobiology Laboratory, Donders Institute for Brain, Cognition, and Behaviour, Radboud University, Nijmegen 6525 AJ, The Netherlands.ORCID 0000-0002-0970-7411
Jennifer L DumouchelTherapeutic Sciences Graduate Program, Brown University, Providence, RI 02912.ORCID 0000-0001-9954-2149
Erik StorkebaumMolecular Neurobiology Laboratory, Donders Institute for Brain, Cognition, and Behaviour, Radboud University, Nijmegen 6525 AJ, The Netherlands.ORCID 0000-0002-9519-5642
Dragony FuDepartment of Biology, Center for RNA Biology, University of Rochester, Rochester, NY 14627.ORCID 0000-0002-8725-8658
Kate M O'Connor-GilesDepartment of Neuroscience, Brown University, Providence, RI 02912.

Funding

VISUAL INDICES OF NEUROTOXICITYP30ES001247 · NIEHS · UNIVERSITY OF ROCHESTER · PI Sally W Thurston · 1985 to 2026
$42.8M
Function of TRM9L and tRNA Wobble Uridine Modification in the Nervous SystemR01NS117068 · NINDS · BROWN UNIVERSITY · PI Dragony Fu, Kathaleen M O'Connor-Giles · 2020 to 2026
$2.3M
Predoctoral Training Program in Trans-Disciplinary Pharmacological SciencesT32GM077995 · NIGMS · BROWN UNIVERSITY · PI OANCEA, ELENA · 2010 to 2020
$1.7M
Mechanism and functions of DALRD3-dependent tRNA modificationR01GM143145 · NIGMS · UNIVERSITY OF ROCHESTER · PI FU, DRAGONY · 2022 to 2025
$1.2M
Neurodevelopmental role of a tRNA methyltransferase underlying intellectual disabilityF99NS129128 · NINDS · BROWN UNIVERSITY · PI MADHWANI, KIMBERLY ROSE R. · 2022 to 2023
$96k
NIEHS NIH HHS P30 ES001247NIGMS NIH HHS R01 GM143145NIGMS NIH HHS T32 GM077995NINDS NIH HHS F99 NS129128NINDS NIH HHS R01 NS117068
6 · The paper itself

Abstract

Post-transcriptional modification of RNA regulates gene expression at multiple levels. ALKBH8 is a tRNA-modifying enzyme that methylates wobble uridines in a subset of tRNAs to modulate translation. Through methylation of tRNA-selenocysteine, ALKBH8 promotes selenoprotein synthesis and regulates redox homeostasis. Pathogenic variants in

Indexed as

Drosophila ProteinsHomeostasisMemoryOxidation-ReductionOxidative StressSynapsesAlkB Homolog 8, tRNA MethyltransferaseAnimalsDrosophilaDrosophila melanogasterHumansMethylationRNA Processing, Post-TranscriptionalRNA, TransferRNA, Transfer, Amino Acid-SpecificSelenoproteinsAlkB Homolog 8, tRNA MethyltransferaseDrosophila ProteinsRNA, TransferRNA, Transfer, Amino Acid-SpecificSelenoproteinstRNA, selenocysteine-UridinemRNA translationneurodevelopmentoxidative stressRNA modificationtRNA methyltransferase

Identifiers

PMID39495910
PMCPMC11572970

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.