Evidence map›Paper›PMID 39498024›Full record

ArticleHeliyon2024

Filamin B knockdown impairs differentiation and function in mouse pre-osteoblasts via aberrant transcription and alternative splicing.

Xi Wang, Qiyu Jia, Li Yu, Jinyong Huang, Xin Wang, Lijun Zhou, Wubulikasimu Mijiti, Zhenzi Xie, Shiming Dong, Zengru Xie and 1 more

Abstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xi WangState Key Laboratory of Pathogenesis, Prevention and Treatment of High Incidence Diseases in Central Asia, Clinical Medicine Institute, The First Affiliated Hospital of Xinjiang Medical University, Urumqi 830011, Xinjiang, China.
Qiyu JiaXinjiang Clinical Research Center for Orthopedics, Urumqi, 830011, Xinjiang, China.
Li YuDepartment of Integrated Cardiology, The First Affiliated Hospital of Xinjiang Medical University, Urumqi, 830000, China.
Jinyong HuangXinjiang Clinical Research Center for Orthopedics, Urumqi, 830011, Xinjiang, China.
Xin WangXinjiang Clinical Research Center for Orthopedics, Urumqi, 830011, Xinjiang, China.
Lijun ZhouSchool of Public Health, Xinjiang Medical University, Urumqi, 830011 Xinjiang, China.
Wubulikasimu MijitiXinjiang Clinical Research Center for Orthopedics, Urumqi, 830011, Xinjiang, China.
Zhenzi XieSchool of Basic Medicine, Xinjiang Medical University, Urumqi, 830011 Xinjiang, China.
Shiming DongXinjiang Clinical Research Center for Orthopedics, Urumqi, 830011, Xinjiang, China.
Zengru XieXinjiang Clinical Research Center for Orthopedics, Urumqi, 830011, Xinjiang, China.
Hairong MaState Key Laboratory of Pathogenesis, Prevention and Treatment of High Incidence Diseases in Central Asia, Clinical Medicine Institute, The First Affiliated Hospital of Xinjiang Medical University, Urumqi 830011, Xinjiang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Filamin B (FLNB) encodes an actin-binding protein that is known to function as a novel RNA-binding protein involved in cell movement and signal transduction and plays a pivotal role in bone growth. This study aimed to investigate possible FLNB function in the skeletal system by characterizing the effecs of FLNB knockdown in mouse preosteoblast cells. Methods: Stable FLNB MC3T3-E1 knockdown cells were constructed for RNA-seq and alternative splicing event (ASE) analysis of genes involved in osteoblast differentiation and function that may be regulated by FLNB. Standard transwell, MTT, ALP, qPCR, Western blot, and alizarin red staining assays were used to assess functional changes of FLNB-knockdown MC3T3-E1 cells. Results: Analysis of differentially expressed genes (DEGs) in FLNB knockdown cells revealed enrichment for genes related to osteoblast proliferation, differentiation and migration, such as ITGA10, Cebpβ, Grem1, etc. Alternative splicing (AS) analysis showed changes in the predominant mRNA isoforms of skeletal development-related genes, especially Tpx2 and Evc. Functional asslysis indicated that proliferation, migration, and differentiation were all inhibited upon FLNB knockdown in MC3T3-E1 cells compared to that in vector control cells. Conclusions: FLNB participates in regulating the transcription and AS of genes required for osteoblast development and function, consequently affecting growth and development in MC3T3-E1 cells.

Indexed as

Alternative splicingFilamin BMC3T3-E1RNA-Sequencing

Identifiers

PMID39498024
PMCPMC11533582

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.