Evidence map›Paper›PMID 39499632›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Formylation facilitates the reduction of oxidized initiator methionines.

Ruiyue Tan, Margaret Hoare, Philip Bellomio, Sarah Broas, Konttessa Camacho, Kyle Swovick, Kevin A Welle, Jennifer R Hryhorenko, Sina Ghaemmaghami

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Formylation facilitates the reduction of oxidized initiator methionines.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ruiyue TanDepartment of Biology, University of Rochester, Rochester, NY 14627.ORCID 0000-0001-5948-6744
Margaret HoareDepartment of Biology, University of Rochester, Rochester, NY 14627.ORCID 0009-0008-8271-4635
Philip BellomioDepartment of Biology, University of Rochester, Rochester, NY 14627.
Sarah BroasDepartment of Biology, University of Rochester, Rochester, NY 14627.
Konttessa CamachoDepartment of Biology, University of Rochester, Rochester, NY 14627.
Kyle SwovickMass Spectrometry Resource Laboratory, University of Rochester Medical Center, Rochester, NY 14627.ORCID 0000-0003-1161-7957
Kevin A WelleMass Spectrometry Resource Laboratory, University of Rochester Medical Center, Rochester, NY 14627.
Jennifer R HryhorenkoMass Spectrometry Resource Laboratory, University of Rochester Medical Center, Rochester, NY 14627.
Sina GhaemmaghamiDepartment of Biology, University of Rochester, Rochester, NY 14627.ORCID 0000-0002-8696-2950

Funding

The prevalence and mechanism of selectivity in basal autophagyR35GM119502 · NIGMS · UNIVERSITY OF ROCHESTER · PI SINA GHAEMMAGHAMI · 2016 to 2026
$5.9M
Orbitrap Fusion Lumos Mass Spectrometer for UR Proteomics ResearchS10OD025242 · OD · UNIVERSITY OF ROCHESTER · PI GHAEMMAGHAMI, SINA · 2018 to 2018
$1.1M
NIGMS NIH HHS R35 GM119502NIH HHS S10 OD025242ODCDC CDC HHS S10 OD025242
6 · The paper itself

Abstract

Within a cell, protein-bound methionines can be chemically or enzymatically oxidized, and subsequently reduced by methionine sulfoxide reductases (Msrs). Methionine oxidation can result in structural damage or be the basis of functional regulation of enzymes. In addition to participating in redox reactions, methionines play an important role as the initiator residue of translated proteins where they are commonly modified at their α-amine group by formylation or acetylation. Here, we investigated how formylation and acetylation of initiator methionines impact their propensity for oxidation and reduction. We show that in vitro, N-terminal methionine residues are particularly prone to chemical oxidation and that their modification by formylation or acetylation greatly enhances their subsequent enzymatic reduction by MsrA and MsrB. Concordantly, in vivo ablation of methionyl-tRNA formyltransferase (MTF) in

Indexed as

Escherichia coliMethionineOxidation-ReductionAcetylationAmidohydrolasesEscherichia coli ProteinsMethionine Sulfoxide ReductasesMethionyl AminopeptidasesAmidohydrolasesEscherichia coli ProteinsMethionineMethionine Sulfoxide ReductasesMethionyl Aminopeptidasespeptide deformylaseformylationmethioninemethionine sulfoxide reductaseproteomicsredox

Identifiers

PMID39499632
PMCPMC11572973

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.