Evidence map›Paper›PMID 39501349›Full record

ArticleEnvironmental microbiome2024

Parasitic taxa are key to the vertical stratification and community variation of pelagic ciliates from the surface to the abyssopelagic zone.

Yuanyuan Wan, Feng Zhao, Sabine Filker, Ariani Hatmanti, Rongjie Zhao, Kuidong Xu

Abstract read
In one paragraph

Article in Environmental microbiome, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yuanyuan WanLaboratory of Marine Organism Taxonomy and Phylogeny, Qingdao Key Laboratory of Marine Biodiversity and Conservation, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.
Feng ZhaoLaboratory of Marine Organism Taxonomy and Phylogeny, Qingdao Key Laboratory of Marine Biodiversity and Conservation, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China. fzhao@qdio.ac.cn.
Sabine FilkerDepartment of Molecular Ecology, RPTU Kaiserslautern-Landau, 67663, Kaiserslautern, Germany.
Ariani HatmantiResearch Center for Oceanography, The National Research and Innovation Agency, Jakarta, 14430, Indonesia.
Rongjie ZhaoLaboratory of Marine Organism Taxonomy and Phylogeny, Qingdao Key Laboratory of Marine Biodiversity and Conservation, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.
Kuidong XuLaboratory of Marine Organism Taxonomy and Phylogeny, Qingdao Key Laboratory of Marine Biodiversity and Conservation, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China. kxu@qdio.ac.cn.

Funding

National Natural Science Foundation of China No. 41930533National Natural Science Foundation of China No. 42376134Science and Technology Innovation Project of Laoshan Laboratory LSKJ202203102Strategic Priority Research Program of the Chinese Academy of Sciences No. XDB42000000Youth Innovation Promotion Association of the Chinese Academy of Sciences No. 2022206
6 · The paper itself

Abstract

backgroundAn increase in upper-ocean thermal stratification is being observed worldwide due to global warming. However, how ocean stratification affects the vertical profile of plankton communities remains unclear. Understanding this is crucial for assessing the broader implications of ocean stratification. Pelagic ciliates cover multiple functional groups, and thus can serve as a model for studying the vertical distribution and functional strategies of plankton in stratified oceans. We hypothesize that pelagic ciliate communities exhibit vertical stratification caused by shifts in functional strategies, from free-living groups in the photic zone to parasitic groups in deeper waters.

results306 samples from the surface to the abyssopelagic zone were collected from 31 stations in the western Pacific and analyzed with environmental DNA (the V4 region of 18 S rDNA) metabarcoding of pelagic ciliates. We found a distinct vertical stratification of the entire ciliate communities, with a boundary at a depth of 200 m. Significant distance-decay patterns were found in the photic layers of 5 m to the deep chlorophyll maximum and in the 2,000 m, 3000 m and bottom layers, while no significant pattern occurred in the mesopelagic layers of 200 m - 1,000 m. Below 200 m, parasitic Oligohymenophorea and Colpodea became more prevalent. A linear model showed that parasitic taxa were the main groups causing community variation along the water column. With increasing depth below 200 m, the ASV and sequence proportions of parasitic taxa increased. Statistical analyses indicated that water temperature shaped the photic communities, while parasitic taxa had a significant influence on the aphotic communities below 200 m.

conclusionsThis study provides new insights into oceanic vertical distribution, connectivity and stratification from a biological perspective. The observed shift of functional strategies from free-living to parasitic groups at a 200 m transition layer improves our understanding of ocean ecosystems in the context of global warming.

Indexed as

Community connectivityDeep-seaFunctional strategyHigh-throughput sequencingPacific OceanPlankton

Identifiers

PMID39501349
PMCPMC11539804

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.