Evidence map›Paper›PMID 39533010›Full record

ArticleScientific reports2024

Genome-wide analysis of quorum sensing regulon in marine fish pathogen Vibrio scophthalmi.

Bokyung Seok, Myoung Sug Kim, Byoung Sik Kim

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Bokyung SeokDepartment of Food Science and Biotechnology, College of Engineering, Ewha Womans University, Seoul, 03760, South Korea.
Myoung Sug KimPathology Research Division, National Institute of Fisheries Science, Busan, 46083, South Korea.
Byoung Sik KimDepartment of Food Science and Biotechnology, College of Engineering, Ewha Womans University, Seoul, 03760, South Korea. b.kim@ewha.ac.kr.

Funding

Korea government (MSIT) RS-2023-00280142National Institute of Fisheries Science R2022076
6 · The paper itself

Abstract

Opportunistic fish pathogen Vibrio scophthalmi frequently infects olive flounder and turbot, which are primary marine species cultured for seafood production in Far East Asia. These infections cause substantial yield reductions and significant economic losses. Although quorum sensing (QS) genes were previously reported in V. scophthalmi, the impacts of QS on genome-wide gene expression and consequent behaviors and physiological traits have remained largely unexplored. In this study, we conducted genomic and transcriptomic analyses to uncover the global regulatory network governed by LuxR

Indexed as

BiofilmsQuorum SensingRegulonVibrioAnimalsBacterial ProteinsFish DiseasesFlatfishesGene Expression ProfilingGene Expression Regulation, BacterialGenome, BacterialGenome-Wide Association StudyPolyhydroxyalkanoatesVibrio InfectionsBacterial ProteinsPolyhydroxyalkanoatesFish pathogenLuxR regulonQuorum sensingSeafood productionVibrio scophthalmi

Identifiers

PMID39533010
PMCPMC11558012

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.