Evidence map›Paper›PMID 39543456›Full record

ArticleFEBS open bio2025

DDX3 participates in miRNA biogenesis and RNA interference through translational control of PACT and interaction with AGO2.

Ming-Chih Lai, Yen-Ling Yu, Chiao-Nung Chen, Jau-Song Yu, Hsin-Yuan Hung, Shih-Peng Chan

Abstract read
In one paragraph

Article in FEBS open bio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ming-Chih LaiDepartment of Biomedical Sciences, Chang Gung University, Taoyuan, Taiwan.ORCID https://orcid.org/0000-0003-2656-9396
Yen-Ling YuDepartment of Biomedical Sciences, Chang Gung University, Taoyuan, Taiwan.
Chiao-Nung ChenGraduate Institute of Microbiology, National Taiwan University, Taipei, Taiwan.
Jau-Song YuGraduate Institute of Biomedical Sciences, Chang Gung University, Taoyuan, Taiwan.
Hsin-Yuan HungDepartment of Colorectal Surgery, New Taipei Municipal Tucheng Hospital, Taiwan.
Shih-Peng ChanGraduate Institute of Microbiology, National Taiwan University, Taipei, Taiwan.ORCID https://orcid.org/0000-0001-6322-2821

Funding

Chang Gung Memorial Hospital, Taiwan CMRPD1M0661Chang Gung Memorial Hospital, Taiwan CMRPD1M0662National Science and Technology Council 104-2320-B-182-037National Science and Technology Council 112-2320-B-182-014
6 · The paper itself

Abstract

DDX3 is a DEAD-box RNA helicase that plays multiple roles in RNA metabolism, including translation. We previously reported that DDX3 is required for translation of PACT, a binding partner of Dicer, suggesting a role for DDX3 in microRNA (miRNA) biogenesis and RNA interference (RNAi). Emerging evidence suggests that DDX3 plays a vital role in tumorigenesis and cancer progression, however, its underlying mechanism is still not fully understood. Here, we showed that the control of PACT by DDX3 is conserved in human cells and Caenorhabditis elegans. Using a miRNA microarray, we found that DDX3 regulates the expression of a small subset of cancer-related miRNAs. These oncogenic miRNAs were down-regulated by knockdown of DDX3 or PACT and up-regulated by overexpression of DDX3 or PACT in HEK293T cells. Similar results were obtained in human cancer HCT116 and HeLa cells. Dual luciferase reporter assay showed that DDX3 and PACT are required for short hairpin RNA (shRNA)-induced RNAi. We also performed co-immunoprecipitation to confirm the interaction between DDX3 and AGO2, a significant component of the RNA-induced silencing complex, supporting a role for DDX3 in the RNAi pathway. We further examined the effects of DDX3 and PACT on cell proliferation, and stable overexpression of DDX3 in HEK293 cells results in loss of contact inhibition of cell growth. Hence, we propose that DDX3 may participate in cancer development by regulating the RNAi pathway.

Indexed as

Argonaute ProteinsDEAD-box RNA HelicasesMicroRNAsRNA InterferenceAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsHCT116 CellsHEK293 CellsHeLa CellsHumansProtein BiosynthesisAGO2 protein, humanArgonaute ProteinsCaenorhabditis elegans ProteinsDDX3X protein, humanDEAD-box RNA HelicasesMicroRNAscancer developmentDEAD‐box RNA helicasemiRNA biogenesisRNA interferencetranslational control

Identifiers

PMID39543456
PMCPMC11705417

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.