Evidence map›Paper›PMID 39546272›Full record

ArticleJournal of physiology and biochemistry2025

Prognostic model development using novel genetic signature associated with adenosine metabolism and immune status for patients with hepatocellular carcinoma.

Yidan Chen, Kemei Wang, Xingyun Zhang, Dongying Tao, Yulong Shang, Ping Wang, Qiang Li, Yansheng Liu

Abstract read
In one paragraph

Article in Journal of physiology and biochemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yidan ChenNational Clinical Research Center for Digestive Diseases and Xijing Hospital of Digestive Diseases, Xijing Hospital, Air Force Medical University, Xi'an, China.
Kemei WangNational Clinical Research Center for Digestive Diseases and Xijing Hospital of Digestive Diseases, Xijing Hospital, Air Force Medical University, Xi'an, China.
Xingyun ZhangDepartment of General Medicine, Xijing Hospital, Air Force Medical University, Xi'an, China.
Dongying TaoDepartment of Pediatric, Xijing Hospital, Air Force Medical University, Xi'an, China.
Yulong ShangNational Clinical Research Center for Digestive Diseases and Xijing Hospital of Digestive Diseases, Xijing Hospital, Air Force Medical University, Xi'an, China.
Ping WangDepartment of Gastroenterology, Dongying People's Hospital, Dongying, China. 13792081898@163.com.
Qiang LiNational Clinical Research Center for Digestive Diseases and Xijing Hospital of Digestive Diseases, Xijing Hospital, Air Force Medical University, Xi'an, China. 13669287592@163.com.
Yansheng LiuNational Clinical Research Center for Digestive Diseases and Xijing Hospital of Digestive Diseases, Xijing Hospital, Air Force Medical University, Xi'an, China. liuyansheng506@163.com.

Funding

Key Research and Development Projects of Shaanxi Province 2023-ZDLSF-33National Natural Science Foundation of China 82200577 and 82173241Science and Technology Innovation team of Shaanxi Province 2024RS-CXTD-79
6 · The paper itself

Abstract

The high mortality rate of hepatocellular carcinoma (HCC) is partly due to advanced diagnosis, emphasizing the need for effective predictive tools in HCC treatment. The aim of this study is to propose a novel prognostic model for HCC based on adenosine metabolizing genes and explore the potential relationship between them. Regression analysis was performed to identify differentially expressed genes associated with adenosine metabolism in HCC patients using RNA sequencing data obtained from a public database. Adenosine metabolism-related risk score (AMrisk) was derived using the least absolute shrinkage and selection operator (LASSO) Cox regression and verified using another database. Changes in adenosine metabolism in HCC were analyzed using functional enrichment analysis and multiple immune scores. The gene expression levels in patient samples were validated using quantitative reverse transcription polymerase chain reaction. Thirty adenosine metabolism-related differentially expressed genes were identified in HCC, and six genes (ADA, P2RY4, P2RY6, RPIA, SLC6A3, and VEGFA) were used to calculate the AMrisk score; the higher the risk scores, the lower the overall survival. Moreover, immune infiltration activation and immune checkpoints were considerably higher in the high-risk group. Additional in vitro experiments validated the enhanced expression of these six genes in HCC. The established predictive model demonstrated that adenosine metabolism-related genes was significantly associated with prognosis in HCC patients.

Indexed as

AdenosineBiomarkers, TumorCarcinoma, HepatocellularLiver NeoplasmsAdenosine DeaminaseFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleMiddle AgedNomogramsPrognosisTranscriptomeVascular Endothelial Growth Factor AAdenosineAdenosine DeaminaseBiomarkers, TumorVascular Endothelial Growth Factor AAdenosine metabolismGenetic signatureHepatocellular carcinomaImmune checkpointImmune status

Identifiers

PMID39546272
PMCPMC11958414

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.