Evidence map›Paper›PMID 39546552›Full record

ArticlePloS one2024

JmjC domain-containing histone demethylase gene family in Chinese cabbage: Genome-wide identification and expressional profiling.

Fengrui Yin, Yuanfeng Hu, Xiaoqun Cao, Xufeng Xiao, Ming Zhang, Yan Xiang, Liangdeng Wang, Yuekeng Yao, Meilan Sui, Wenling Shi

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Peptide Hormone-Mediated Regulation of Plant Development and Environmental Adaptability.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Fengrui YinCollege of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, P. R. China.
Yuanfeng HuAgricultural Sciences Research Center, Pingxiang, Jiangxi Province, P. R. China.
Xiaoqun CaoCollege of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, P. R. China.
Xufeng XiaoCollege of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, P. R. China.ORCID 0000-0001-5527-5384
Ming ZhangDepartment of Biotechnology, Jiangxi Biotech Vocational College, Nanchang, Jiangxi Province, P. R. China.
Yan XiangCollege of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, P. R. China.
Liangdeng WangCollege of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, P. R. China.
Yuekeng YaoCollege of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, P. R. China.
Meilan SuiCollege of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, P. R. China.
Wenling ShiDepartment of Biotechnology, Jiangxi Biotech Vocational College, Nanchang, Jiangxi Province, P. R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Jumonji C (JmjC) structural domain-containing gene family plays essential roles in stress responses. However, descriptions of this family in Brassica rapa ssp. pekinensis (Chinese cabbage) are still scarce. In this study, we identified 29 members of the BrJMJ gene family, with cis-acting elements related to light, low temperature, anaerobic conditions, and phytohormone responses. Most BrJMJs were highly expressed in the siliques and flowers, suggesting that histone demethylation may play a crucial role in reproductive organ development. The expression of BrJMJ1, BrJMJ2, BrJMJ5, BrJMJ13, BrJMJ21 and BrJMJ24 gradually increased with higher Cd concentration under Cd stress, while BrJMJ4 and BrJMJ29 could be induced by osmotic, salt, cold, and heat stress. These results demonstrate that BrJMJs are responsive to abiotic stress and support future analysis of their biological functions.

Indexed as

Gene Expression Regulation, PlantJumonji Domain-Containing Histone DemethylasesPlant ProteinsStress, PhysiologicalBrassicaBrassica rapaGene Expression ProfilingGenome, PlantMultigene FamilyPhylogenyJumonji Domain-Containing Histone DemethylasesPlant Proteins

Identifiers

PMID39546552
PMCPMC11567544

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.