Evidence mapPaperPMID 39554687Full record

ArticlePakistan journal of medical sciences2024

Identification of genetic risk variants for Type-2 Diabetes mellitus in Pakistani Pashtun population: A case-control association study.

Asif Jan, Ramzi A Mothana, Jun-Ya Kaimori, Tahir Muhammad, Mehtab Khan, Syed Shaukat Ali, Naveed Rahman, Abdullah R Alanzi

Abstract read
In one paragraph

Article in Pakistan journal of medical sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Asif JanAsif Jan, District Headquarter Hospital (DHQH) Charsadda, Charsadda 24430, Pakistan. Department of Pharmacy, University of Peshawar, Peshawar 25000, Pakistan.
Ramzi A MothanaRamzi A. Mothana, Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh 1151, Saudi Arabia.
Jun-Ya KaimoriJun-Ya Kaimori, Department of Nephrology, Osaka University Graduate School of Medicine, Suita, 2-2 Yamadaoka, Suita, Osaka 565-0871, Japan. Institute of Medical Science, University of Toronto, Toronto 43964, ON, Canada.
Tahir MuhammadTahir Muhammad, Molecular Neuropsychiatry & Development (MiND) Lab, Campbell Family Mental Health, Research Institute, Centre for Addiction & Mental Health, Toronto 43964, ON, Canada.
Mehtab KhanMehtab Khan, Department of Biology, Faculty of Science, University of Moncton, Canada.
Syed Shaukat AliSyed Shaukat Ali, Department of Pharmacy, University of Malakand, Pakistan.
Naveed RahmanNaveed Rahman, Department of Pharmacy, University of Peshawar, Peshawar 25000, Pakistan.
Abdullah R AlanziAbdullah R. Alanzi, Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh 1151, Saudi Arabia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and Objective: Pakistan, a South Asian developing country, is experiencing a rapid increase in number of diabetes cases. High prevalence ratio of diabetes in Pakistani population and lack of genetic research studies prompted us to design this study. This present study investigated Pakistani Pashtun population for (known and novel SNPs) and its possible correlation with Type-2 Diabetes Mellitus (T2DM). Methods: This two stage (discovery & validation stage), case-control association study included one thousand individuals (Patients with T2DM=500 & controls=500) from eight districts of Khyber Pakhtunkhwa Pakistan. The study duration/period was from March 2018 to January 2020. In the first stage (the discovery stage) the target population was screened for known and novel T2DM-associated genetic markers. In the validation stage, identified variants were confirmed for T2DM association using MassARRAY genotyping and association analysis. Results: Exome sequencing detected eleven known and four novel/new genetic markers in the study population. Novel variants were preferred over the known for follow-up analysis/validation. Among the identified variants strong associations were confirmed for the following variants; rs1781133/ Conclusion: This study reports new genetic risk variants for T2DM in Pashtun population providing valuable insights into the genetic basis of T2DM in this group.

Indexed as

Exome Sequencing (ES)GenotypingMassARRAYPakistanPashtunRisk variantsType-2 Diabetes Mellitus (T2DM)

Identifiers

PMID39554687
PMCPMC11568737

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.