Evidence map›Paper›PMID 39555097›Full record

ArticleFrontiers in pharmacology2024

Transcriptome analysis revealed the genes and major pathways involved in prunetrin treated hepatocellular carcinoma cells.

Abuyaseer Abusaliya, Hun Hwan Kim, Preethi Vetrivel, Pritam Bhagwan Bhosale, Se Hyo Jeong, Min Yeong Park, Si Joon Lee, Gon Sup Kim

Abstract read
In one paragraph

Article in Frontiers in pharmacology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Abuyaseer AbusaliyaDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju, Republic of Korea.
Hun Hwan KimDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju, Republic of Korea.
Preethi VetrivelDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju, Republic of Korea.
Pritam Bhagwan BhosaleDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju, Republic of Korea.
Se Hyo JeongDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju, Republic of Korea.
Min Yeong ParkDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju, Republic of Korea.
Si Joon LeePreclinical Research Center, Daegu-Gyeongbuk Medical Innovation Foundation, Daegu, Republic of Korea.
Gon Sup KimDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju, Republic of Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liver cancer represents a complex and severe ailment that poses tough challenges to global healthcare. Transcriptome sequencing plays a crucial role in enhancing our understanding of cancer biology and accelerating the development of more effective methods for cancer diagnosis and treatment. In the course of our current investigation, we identified a total of 1,149 differentially expressed genes (DEGs), encompassing 499 upregulated and 650 downregulated genes, subsequent to prunetrin (PUR) treatment. Our methodology encompassed gene and pathway enrichment analysis, functional annotation, KEGG pathway assessments, and protein-protein interaction (PPI) analysis of the DEGs. The preeminent genes within the DEGs were found to be associated with apoptotic processes, cell cycle regulation, the PI3k/Akt pathway, the MAPK pathway, and the mTOR pathway. Furthermore, key apoptotic-related genes exhibited close interconnections and cluster analysis found three interacting hub genes namely,

Indexed as

Hep3B cellshepatocellular carcinomaprunetrinRNA-seqtranscriptome sequencing

Identifiers

PMID39555097
PMCPMC11563786

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.