Evidence map›Paper›PMID 39565856›Full record

ArticleScience advances2024

Entangled and non-modular enhancer sequences producing independent spatial activities.

Mariam Museridze, Stefano Ceolin, Bettina Mühling, Srishti Ramanathan, Olga Barmina, Pallavi Santhi Sekhar, Nicolas Gompel

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Evolution of repressive sequences within an enhancer contributed to morphological diversity in crucifer plants.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Article
  4. Regulatory Changes in the Fatty Acid ElongasebioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mariam MuseridzeLudwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Planegg-Martinsried, Germany.ORCID 0009-0003-0825-0995
Stefano CeolinLudwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Planegg-Martinsried, Germany.
Bettina MühlingLudwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Planegg-Martinsried, Germany.ORCID 0000-0003-4901-0560
Srishti RamanathanLudwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Planegg-Martinsried, Germany.
Olga BarminaDepartment of Evolution and Ecology, University of California, Davis, Davis, CA, USA.ORCID 0000-0002-2297-4362
Pallavi Santhi SekharLudwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Planegg-Martinsried, Germany.ORCID 0009-0002-2781-1404
Nicolas GompelLudwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Planegg-Martinsried, Germany.ORCID 0000-0003-3358-7963

Funding

Molecular Genetics of Evolutionary InnovationsR35GM122592 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ARTYOM KOPP · 2017 to 2026
$4.5M
NIGMS NIH HHS R35 GM122592
6 · The paper itself

Abstract

The modularity of transcriptional enhancers is central to our understanding of morphological evolution, allowing specific changes to a gene expression pattern component, without affecting others. Enhancer modularity refers to physically separated stretches of regulatory sequence producing discrete spatiotemporal transcriptional activity. This concept stems from assays that test the sufficiency of a DNA segment to drive spatial reporter expression resembling that of the corresponding gene. Focusing on spatial patterns, it overlooks quantitative aspects of gene expression, underestimating the regulatory sequence actually required to reach full endogenous expression levels. Here, we show that five regulatory activities of the gene

Indexed as

Enhancer Elements, GeneticAnimalsDrosophilaDrosophila melanogasterDrosophila ProteinsGene Expression RegulationDrosophila Proteins

Identifiers

PMID39565856
PMCPMC11578167

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.