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ArticleNeuromolecular medicine2024

Transcriptomic Profiling Reveals Sex-Specific Epigenetic Dynamics Involving kdm6b and H3K27 Methylation in Cerebral Ischemia-Induced Neurogenesis and Recovery.

Mydhili Radhakrishnan, Aditya Undru, Shashikant Patel, Pooja Sharma, Arvind Kumar, Sumana Chakravarty

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Article in Neuromolecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Mydhili RadhakrishnanApplied Biology, CSIR-Indian Institute of Chemical Technology (IICT), Tarnaka, Hyderabad, 500007, India.
Aditya UndruCSIR-Centre for Cellular and Molecular Biology (CCMB), Hyderabad, 500007, India.
Shashikant PatelApplied Biology, CSIR-Indian Institute of Chemical Technology (IICT), Tarnaka, Hyderabad, 500007, India.
Pooja SharmaApplied Biology, CSIR-Indian Institute of Chemical Technology (IICT), Tarnaka, Hyderabad, 500007, India.
Arvind KumarCSIR-Centre for Cellular and Molecular Biology (CCMB), Hyderabad, 500007, India. akumar@ccmb.res.in.
Sumana ChakravartyApplied Biology, CSIR-Indian Institute of Chemical Technology (IICT), Tarnaka, Hyderabad, 500007, India. sumanachak@iict.res.in.

Funding

Council of Scientific and Industrial Research, India BSC0103-UNDOIndian Council of Medical Research 5/4-5/3/17/Neuro/2022-NCD-1
6 · The paper itself

Abstract

Cerebral ischemic stroke ranks among the leading causes of death and disability worldwide. A significant challenge, beyond the lack of effective therapies, is the frequent oversight of sex as a vital factor in stroke research. This study focuses on elucidating the sex-specific epigenetic mechanisms that contribute to neural damage and recovery in cerebral ischemia. In our previously reported study, we demonstrated that following ischemia-induced cerebral artery occlusion (ICAO), female striatal tissue exhibited an early reinstatement of H3K9me2 marks on the promoters of inflammatory genes compared to male striatal tissue. This restoration led to a reduction in the expression of inflammatory cytokines, ultimately contributing to accelerated recovery in females. Building upon these findings, the current study aimed to investigate the unidentified molecular pathways responsible for the accelerated recovery observed in females. To explore this, we performed illumina-RNA sequencing on striatal tissues 24-h post-ICAO. Interestingly, our analysis revealed differential regulation of H3K27me2 marks on the promoters of various neurogenic genes at an early stage, which facilitated early neurogenesis in the female striatum. This investigation identifies an epigenetic modulator, kdm6b/jmjd3, targeting H3K27, and delineates its sex-specific role in neural stem cell proliferation. The findings contribute to a comprehensive model linking gender-specific epigenetic regulation, neurogenesis, and post-ICAO recovery. In conclusion, the identified epigenetic modulators and their roles in neurogenesis offer potential targets for refined therapeutic interventions, emphasizing the importance of personalized and sex-specific considerations in stroke studies.

Indexed as

Epigenesis, GeneticGene Expression ProfilingHistonesIschemic StrokeJumonji Domain-Containing Histone DemethylasesNeurogenesisAnimalsCorpus StriatumFemaleInfarction, Middle Cerebral ArteryMaleMethylationMiceMice, Inbred C57BLPromoter Regions, GeneticRecovery of FunctionHistonesJumonji Domain-Containing Histone DemethylasesKdm6b protein, mouseCerebral ischemiaIllumina-RNA sequencingkdm6b/jmjd3NeurogenesisSex-difference

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.