Evidence map›Paper›PMID 39586790›Full record

ArticleJournal of cellular and molecular medicine2024

LINC01929 Is a Prognostic Biomarker for Multiple Tumours and Promotes Cell Proliferation in Breast Cancer Through the TNF/STAT3 Axis.

Yanlin Gu, Zhengyang Feng, Xiaoyan Xu, Liyan Jin, Guoqin Jiang

Abstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yanlin GuDepartment of Thyroid and Breast Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Zhengyang FengDepartment of Oncology, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Xiaoyan XuDepartment of Operating Room, Traditional Chinese Medicine Hospital of Kunshan, Kunshan, China.
Liyan JinDepartment of Thyroid and Breast Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Guoqin JiangDepartment of Thyroid and Breast Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.ORCID 0000-0001-7913-341X

Funding

Beijing City Technology Innovation Fund KC2021-JF-0167-8Gusu talent plan for Health Technical Personnel project of Suzhou GSWS2021024State Key Laboratory of Radiation Medicine and Protection GZK12024047Suzhou Health Young Key Talents"National Tutorial system" training project Qngg2024008The Suzhou Science and Technology Bureau KJXW2022011
6 · The paper itself

Abstract

The aim of this study was to investigate whether long intergenic non-coding RNA 1929 (LINC01929), a novel long non-coding RNA, could serve as a prognostic biomarker for various tumours and explore its function. The expression and prognosis of LINC01929 across 33 different tumour types in patients in the Cancer Genome Atlas (TCGA) database were analysed. Also, the correlation between LINC01929 expression, tumour mutational burden (TMB), microsatellite instability (MSI), immune checkpoint status and immune cell infiltration was examined. Moreover, the function of LINC01929 in the breast cancer cell lines was explored via CCK-8, colony formation and cell cycle assays. In addition, the downstream mechanisms of LINC01929 were analysed via transcriptome sequencing, RT-qPCR, and western blotting. Our analysis revealed that LINC01929 was weakly expressed in 3 tumour types and highly expressed in 14 tumour types, and low expression of LINC01929 was correlated with better clinical outcomes in 15 tumour types. Furthermore, LINC01929 expression was correlated significantly with the TMB, MSI, immune checkpoint and immune cell infiltration across multiple tumour types. The knockdown of LINC01929 inhibited cell cycle progression, cell proliferation, and tumorigenesis and downregulated the TNF pathway and STAT3 expression. The treatment with exogenous TNF-α partially reversed the cell cycle progression and proliferation inhibition caused by LINC01929 knockdown, and these effects were accompanied by changes in STAT3 expression. LINC01929 may serve as an effective biomarker affecting the TMB, MSI, immune cell infiltration and immune checkpoint status. Mechanistically, LINC01929 affects cell cycle progression and cell proliferation through the TNF/STAT3 axis. These findings offer valuable insights into the potential applications of LINC01929 in tumour therapy, which may yield novel targets and strategies for the diagnosis and treatment of patients.

Indexed as

Biomarkers, TumorBreast NeoplasmsCell ProliferationGene Expression Regulation, NeoplasticRNA, Long NoncodingSTAT3 Transcription FactorTumor Necrosis Factor-alphaCell Line, TumorFemaleHumansPrognosisSignal TransductionBiomarkers, TumorRNA, Long NoncodingSTAT3 protein, humanSTAT3 Transcription FactorTumor Necrosis Factor-alphabiomarkercancerprognosis

Identifiers

PMID39586790
PMCPMC11588430

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.