Evidence map›Paper›PMID 39605387›Full record

ArticlebioRxiv : the preprint server for biology2024

Modeling Complex Animal Behavior with Latent State Inverse Reinforcement Learning.

Aditi Jha, Victor Geadah, Jonathan W Pillow

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Aditi JhaDepartment of Electrical and Computer Engineering, Princeton University.
Victor GeadahProgram in Computational and Applied Mathematics, Princeton University.ORCID 0000-0003-4645-2144
Jonathan W PillowPrinceton Neuroscience Institute, Princeton University.ORCID 0000-0002-3638-8831

Funding

Subcortical Neural Coding and DynamicsU19NS104648 · NINDS · PRINCETON UNIVERSITY · PI BRODY, CARLOS D · 2017 to 2021
$15.3M
Mechanisms of persistent neural activityR01EY033064 · NEI · UNIVERSITY OF TEXAS AT AUSTIN · PI Alexander C Huk, Jonathan William Pillow · 2022 to 2026
$2.6M
Adaptive statistical algorithms for learning and control of neural dynamicsRF1DA056404 · NIDA · PRINCETON UNIVERSITY · PI PARK, IL MEMMING, PILLOW, JONATHAN WILLIAM · 2022 to 2022
$969k
NEI NIH HHS R01 EY033064NIDA NIH HHS RF1 DA056404NINDS NIH HHS U19 NS104648
6 · The paper itself

Abstract

Understanding complex animal behavior is crucial for linking brain computation to observed actions. While recent research has shifted towards modeling behavior as a dynamic process, few approaches exist for modeling long-term, naturalistic behaviors such as navigation. We introduce discrete Dynamical Inverse Reinforcement Learning (dDIRL), a latent state-dependent paradigm for modeling complex animal behavior over extended periods. dDIRL models animal behavior as being driven by internal state-specific rewards, with Markovian transitions between the distinct internal states. Using expectation-maximization, we infer reward functions corresponding to each internal states and the transition probabilities between them, from observed behavior. We applied dDIRL to water-starved mice navigating a labyrinth, analyzing each animal individually. Our results reveal three distinct internal states sufficient to describe behavior, including a consistent water-seeking state occupied for less than half the time. We also identified two clusters of animals with different exploration patterns in the labyrinth. dDIRL offers a nuanced understanding of how internal states and their associated rewards shape observed behavior in complex environments, paving the way for deeper insights into the neural basis of naturalistic behavior.

Identifiers

PMID39605387
PMCPMC11601398

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.